RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 KCNIP4Q6PIL6 250 aa7.17□□□□□ -1.26
HNRNPC-230ENST00000557201 C10orf126Q8N4M7 172 aa7.17□□□□□ -1.26
HNRNPC-230ENST00000557201 GATD1Q8NB37 220 aa7.17□□□□□ -1.26
HNRNPC-230ENST00000557201 MGPP08493 103 aa7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 S100PP25815 95 aa7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 CAMPP49913 170 aa7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 RPL36AP83881 106 aaKnown RBP7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 MRPL54Q6P161 138 aaKnown RBP7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 NTN5Q8WTR8 489 aaPredicted RBP7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 RPL36ALQ969Q0 106 aaKnown RBP7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
HNRNPC-230ENST00000557201 IGHV3-38A0A0C4DH36 116 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 GAGE12JA6NER3 117 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 RAB4AP20338 218 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 GAGE1Q13065 139 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 GAGE4Q13068 117 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 GAGE5Q13069 117 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 GAGE13Q4V321 117 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 LINC01556Q5JQF7 62 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 AMN1Q8IY45 258 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 NEXN-AS1Q8NBZ9 246 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 RNF185Q96GF1 192 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 DNAJC30Q96LL9 226 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 NIT2Q9NQR4 276 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.26
HNRNPC-230ENST00000557201 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
HNRNPC-230ENST00000557201 UBE2D3P61077 147 aa7.14□□□□□ -1.27
HNRNPC-230ENST00000557201 UBE2D2P62837 147 aa7.14□□□□□ -1.27
HNRNPC-230ENST00000557201 ATP6V0E2Q8NHE4 81 aa7.14□□□□□ -1.27
HNRNPC-230ENST00000557201 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
HNRNPC-230ENST00000557201 GTSF1LQ9H1H1 148 aa7.14□□□□□ -1.27
HNRNPC-230ENST00000557201 TRAV26-2A0A0B4J265 109 aa7.13□□□□□ -1.27
HNRNPC-230ENST00000557201 DAZ4Q86SG3 579 aaKnown RBP7.13□□□□□ -1.27
HNRNPC-230ENST00000557201 Q8N814 137 aa7.13□□□□□ -1.27
HNRNPC-230ENST00000557201 DAZ3Q9NR90 486 aaKnown RBP7.13□□□□□ -1.27
HNRNPC-230ENST00000557201 URGCP-MRPS24S4R325 110 aa7.13□□□□□ -1.27
HNRNPC-230ENST00000557201 TRBV6-5A0A0K0K1A5 114 aa7.12□□□□□ -1.27
HNRNPC-230ENST00000557201 PPP1R17O96001 155 aa7.12□□□□□ -1.27
HNRNPC-230ENST00000557201 PPBPP02775 128 aa7.12□□□□□ -1.27
HNRNPC-230ENST00000557201 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
HNRNPC-230ENST00000557201 ATRAIDQ6UW56 229 aa7.12□□□□□ -1.27
HNRNPC-230ENST00000557201 TRBV24-1A0A075B6N3 115 aa7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 ELOBQ15370 118 aa7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 COX19Q49B96 90 aa7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 LELP1Q5T871 98 aa7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 Q6ZSA8 131 aa7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 GNB1LQ9BYB4 327 aa7.11□□□□□ -1.27
HNRNPC-230ENST00000557201 PSCAO43653 123 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 GAS8-AS1O95177 125 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 RPS10P46783 165 aaKnown RBP7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 WFDC2Q14508 124 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 TMEM97Q5BJF2 176 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 NRACQ8N912 160 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 RPL39LQ96EH5 51 aaKnown RBP7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
HNRNPC-230ENST00000557201 TRBV6-8A0A0A6YYG3 113 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 PHOX2AO14813 284 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 CKS2P33552 79 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 LAGE3Q14657 143 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 OR10J3Q5JRS4 329 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 Q9HAA7 133 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 SMCO4Q9NRQ5 59 aa7.09□□□□□ -1.27
HNRNPC-230ENST00000557201 TGIF2-C20orf24A0A0A6YYL0 155 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 TRAV8-6A0A0B4J262 113 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 TRBV27A0A0K0K1C4 114 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 D6R8Y8 96 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 IGHV3-30P01768 117 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 IGHV3-33P01772 117 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 MT-ND6P03923 174 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 IGHV3-30-3P0DP02 117 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 IGHV3-30-5P0DP03 117 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 POLR2KP53803 58 aaKnown RBP7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 CTAG1AP78358 180 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 ORMDL3Q8N138 153 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 TNFRSF6BO95407 300 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 NCR2O95944 276 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 RPL32P62910 135 aaKnown RBP7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 IQCJQ1A5X6 159 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 NTM-AS1Q6ZSK4 140 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 Q8N3U1 123 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 LAMTOR2Q9Y2Q5 125 aa7.08□□□□□ -1.28
HNRNPC-230ENST00000557201 I3L3M4 83 aa7.07□□□□□ -1.28
HNRNPC-230ENST00000557201 VCYO14598 125 aa7.07□□□□□ -1.28
HNRNPC-230ENST00000557201 APCSP02743 223 aa7.07□□□□□ -1.28
HNRNPC-230ENST00000557201 COTL1Q14019 142 aa7.07□□□□□ -1.28
HNRNPC-230ENST00000557201 CBLN2Q8IUK8 224 aa7.07□□□□□ -1.28
HNRNPC-230ENST00000557201 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms