RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 IGLV4-60A0A075B6I1 120 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 HIGD1CA8MV81 97 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 SMR3BP02814 79 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-206ENST00000556461 Q0VG73 95 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 LINC00269Q8N2A0 174 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-206ENST00000556461 ISOC2Q96AB3 205 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 RNF185Q96GF1 192 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 TMEM243Q9BU79 118 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 C1orf43Q9BWL3 253 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 PRR34Q9NV39 138 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 COX11Q9Y6N1 276 aa5.31□□□□□ -1.56
VTI1B-206ENST00000556461 CRPP02741 224 aa5.3□□□□□ -1.56
VTI1B-206ENST00000556461 PKIAP61925 76 aa5.3□□□□□ -1.56
VTI1B-206ENST00000556461 ADIRFQ15847 76 aa5.3□□□□□ -1.56
VTI1B-206ENST00000556461 TMEM241Q24JQ0 296 aa5.3□□□□□ -1.56
VTI1B-206ENST00000556461 NUP35Q8NFH5 326 aa5.3□□□□□ -1.56
VTI1B-206ENST00000556461 HERC1Q15751 4861 aa5.3□□□□□ -1.56
VTI1B-206ENST00000556461 IGLV10-54A0A075B6I4 117 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 A0A1B0GUT8 65 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 SMKR1H3BMG3 65 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 HLA-DQA1P01909 254 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
VTI1B-206ENST00000556461 AMTP48728 403 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 COTL1Q14019 142 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 PEA15Q15121 130 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 MIAQ16674 131 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 FAM74A3Q4VXF1 159 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 SMIM15Q7Z3B0 74 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 TMEM70Q9BUB7 260 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 NAT8Q9UHE5 227 aa5.29□□□□□ -1.56
VTI1B-206ENST00000556461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
VTI1B-206ENST00000556461 A0A1B0GUV1 79 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
VTI1B-206ENST00000556461 FAM231BA6NCW3 169 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 SDHAF1A6NFY7 115 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 EPM2AB3EWF7 344 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 USP17L23D6RBM5 183 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 NCR2O95944 276 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 PRSS1P07477 247 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 RAB4AP20338 218 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 REG3AQ06141 175 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 Q5VSD8 79 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 Q6ZSA8 131 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 AMN1Q8IY45 258 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 FRZBQ92765 325 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 TMEM191AQ9H0A3 160 aa5.28□□□□□ -1.56
VTI1B-206ENST00000556461 FLG2Q5D862 2391 aaPredicted RBP5.28□□□□□ -1.56
VTI1B-206ENST00000556461 TRBV6-5A0A0K0K1A5 114 aa5.27□□□□□ -1.57
VTI1B-206ENST00000556461 UBE2L6O14933 153 aa5.27□□□□□ -1.57
VTI1B-206ENST00000556461 TSHBP01222 138 aa5.27□□□□□ -1.57
VTI1B-206ENST00000556461 BORCS7Q96B45 105 aa5.27□□□□□ -1.57
VTI1B-206ENST00000556461 TMEM242Q9NWH2 141 aa5.27□□□□□ -1.57
VTI1B-206ENST00000556461 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
VTI1B-206ENST00000556461 IGKV3OR2-268A0A0C4DH90 116 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 SMIM27A0A1W2PRY6 76 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 I3L3M4 83 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 APCSP02743 223 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 PMCHP20382 165 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 POLR2KP53803 58 aaKnown RBP5.26□□□□□ -1.57
VTI1B-206ENST00000556461 RIGQ13278 110 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 NRACQ8N912 160 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 SMDT1Q9H4I9 107 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 ST20Q9HBF5 79 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 NAT8BQ9UHF3 227 aa5.26□□□□□ -1.57
VTI1B-206ENST00000556461 FGF6P10767 208 aa5.25□□□□□ -1.57
VTI1B-206ENST00000556461 ESDP10768 282 aa5.25□□□□□ -1.57
VTI1B-206ENST00000556461 CAMPP49913 170 aa5.25□□□□□ -1.57
VTI1B-206ENST00000556461 MRPL51Q4U2R6 128 aaKnown RBP5.25□□□□□ -1.57
VTI1B-206ENST00000556461 SCXQ7RTU7 201 aa5.25□□□□□ -1.57
VTI1B-206ENST00000556461 MRAP2Q96G30 205 aa5.25□□□□□ -1.57
VTI1B-206ENST00000556461 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
VTI1B-206ENST00000556461 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 TRAV8-4A0A0B4J246 113 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 SLPIP03973 132 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 INAFM2P0DMQ5 153 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 C14orf177Q52M58 125 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 FAM104BQ5XKR9 115 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 AMMECR1LQ6DCA0 310 aa5.24□□□□□ -1.57
VTI1B-206ENST00000556461 MRPL54Q6P161 138 aaKnown RBP5.24□□□□□ -1.57
VTI1B-206ENST00000556461 RNASEKQ6P5S7 137 aaKnown RBP5.24□□□□□ -1.57
VTI1B-206ENST00000556461 DMBT1Q9UGM3 2413 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-206ENST00000556461 TRBV27A0A0K0K1C4 114 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 A0A1B0GXF2 115 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 PANO1I0J062 215 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 IFITM2Q01629 132 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 LINC00528Q8N1L1 170 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 C15orf56Q8N910 161 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 CIRBP-AS1Q8TBR5 109 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-206ENST00000556461 CHAC1Q9BUX1 264 aa5.23□□□□□ -1.57
VTI1B-206ENST00000556461 hDV102S1A0JD36 115 aa5.22□□□□□ -1.57
VTI1B-206ENST00000556461 FAM229AH3BQW9 127 aa5.22□□□□□ -1.57
VTI1B-206ENST00000556461 H7C423 109 aa5.22□□□□□ -1.57
VTI1B-206ENST00000556461 SUMO2P61956 95 aaKnown RBP5.22□□□□□ -1.57
VTI1B-206ENST00000556461 C9orf163Q8N9P6 203 aa5.22□□□□□ -1.57
VTI1B-206ENST00000556461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-206ENST00000556461 C7orf77A4D0Y5 90 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 VCYO14598 125 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms