RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
ACTN1-219ENST00000556432 TRAV26-2A0A0B4J265 109 aa8.6□□□□□ -1.03
ACTN1-219ENST00000556432 LTAP01374 205 aa8.6□□□□□ -1.03
ACTN1-219ENST00000556432 AKR1C3P42330 323 aa8.6□□□□□ -1.03
ACTN1-219ENST00000556432 PKIGQ9Y2B9 76 aa8.6□□□□□ -1.03
ACTN1-219ENST00000556432 CTXND1A0A1B0GTU2 59 aa8.59□□□□□ -1.03
ACTN1-219ENST00000556432 NKX2-5P52952 324 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-219ENST00000556432 CACNG7P62955 275 aa8.59□□□□□ -1.03
ACTN1-219ENST00000556432 A0A1B0GV50 99 aa8.58□□□□□ -1.04
ACTN1-219ENST00000556432 CST9LP1Q5W188 147 aa8.58□□□□□ -1.04
ACTN1-219ENST00000556432 ZNF664Q8N3J9 261 aa8.58□□□□□ -1.04
ACTN1-219ENST00000556432 C9orf62Q8N4C0 152 aa8.58□□□□□ -1.04
ACTN1-219ENST00000556432 STOML3Q8TAV4 291 aa8.58□□□□□ -1.04
ACTN1-219ENST00000556432 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-219ENST00000556432 MAP1LC3B2A6NCE7 125 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 M0QY20 66 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 SNAI2O43623 268 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 CXCL1P09341 107 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 AMTP48728 403 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 FAM213BQ8TBF2 198 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-219ENST00000556432 MAP1LC3BQ9GZQ8 125 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 MUC2Q02817 5179 aa8.57□□□□□ -1.04
ACTN1-219ENST00000556432 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
ACTN1-219ENST00000556432 TPPP3Q9BW30 176 aa8.56□□□□□ -1.04
ACTN1-219ENST00000556432 MT-ND6P03923 174 aa8.55□□□□□ -1.04
ACTN1-219ENST00000556432 COTL1Q14019 142 aa8.55□□□□□ -1.04
ACTN1-219ENST00000556432 PRR4Q16378 134 aa8.55□□□□□ -1.04
ACTN1-219ENST00000556432 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
ACTN1-219ENST00000556432 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
ACTN1-219ENST00000556432 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
ACTN1-219ENST00000556432 SSBP4Q9BWG4 385 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-219ENST00000556432 RASL11AQ6T310 242 aa8.54□□□□□ -1.04
ACTN1-219ENST00000556432 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
ACTN1-219ENST00000556432 TCEAL7Q9BRU2 100 aa8.54□□□□□ -1.04
ACTN1-219ENST00000556432 EIF5AP63241 154 aaKnown RBP8.53□□□□□ -1.04
ACTN1-219ENST00000556432 SFT2D1Q8WV19 159 aa8.53□□□□□ -1.04
ACTN1-219ENST00000556432 PGLYRP4Q96LB8 373 aa8.53□□□□□ -1.04
ACTN1-219ENST00000556432 UMAD1C9J7I0 102 aa8.52□□□□□ -1.05
ACTN1-219ENST00000556432 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
ACTN1-219ENST00000556432 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
ACTN1-219ENST00000556432 SLC51BQ86UW2 128 aa8.52□□□□□ -1.05
ACTN1-219ENST00000556432 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
ACTN1-219ENST00000556432 XCL1P47992 114 aa8.51□□□□□ -1.05
ACTN1-219ENST00000556432 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
ACTN1-219ENST00000556432 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
ACTN1-219ENST00000556432 FAT4Q6V0I7 4981 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 PAGE4O60829 102 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 S100A9P06702 114 aaKnown RBP8.5□□□□□ -1.05
ACTN1-219ENST00000556432 H2AFB1P0C5Y9 115 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 PTTG1IPP53801 180 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 CCL20P78556 96 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 FOXI1Q12951 378 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 NIT2Q9NQR4 276 aa8.5□□□□□ -1.05
ACTN1-219ENST00000556432 IGHV1-58A0A0C4DH39 117 aa8.49□□□□□ -1.05
ACTN1-219ENST00000556432 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
ACTN1-219ENST00000556432 SYCNQ0VAF6 134 aa8.49□□□□□ -1.05
ACTN1-219ENST00000556432 FER1L6-AS1Q8NA97 138 aa8.49□□□□□ -1.05
ACTN1-219ENST00000556432 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
ACTN1-219ENST00000556432 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-219ENST00000556432 LOC107984640A0A0U1RRK4 108 aa8.48□□□□□ -1.05
ACTN1-219ENST00000556432 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
ACTN1-219ENST00000556432 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-219ENST00000556432 ALKAL2Q6UX46 152 aa8.48□□□□□ -1.05
ACTN1-219ENST00000556432 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
ACTN1-219ENST00000556432 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
ACTN1-219ENST00000556432 MLST8Q9BVC4 326 aa8.47□□□□□ -1.05
ACTN1-219ENST00000556432 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
ACTN1-219ENST00000556432 CCL25O15444 150 aa8.46□□□□□ -1.06
ACTN1-219ENST00000556432 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
ACTN1-219ENST00000556432 APCSP02743 223 aa8.45□□□□□ -1.06
ACTN1-219ENST00000556432 FGF6P10767 208 aa8.45□□□□□ -1.06
ACTN1-219ENST00000556432 CAMPP49913 170 aa8.45□□□□□ -1.06
ACTN1-219ENST00000556432 C9orf116Q5BN46 136 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-219ENST00000556432 OR2D3Q8NGH3 330 aa8.45□□□□□ -1.06
ACTN1-219ENST00000556432 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
ACTN1-219ENST00000556432 IGLV1-50A0A075B6I6 118 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 TRAV1-1A0A0B4J248 108 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 IGLC6P0CF74 106 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 BCL2P10415 239 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 NTF3P20783 257 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 UBE2D1P51668 147 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
ACTN1-219ENST00000556432 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
ACTN1-219ENST00000556432 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
ACTN1-219ENST00000556432 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
ACTN1-219ENST00000556432 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
ACTN1-219ENST00000556432 RPS20P60866 119 aaKnown RBP8.43□□□□□ -1.06
ACTN1-219ENST00000556432 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-219ENST00000556432 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
ACTN1-219ENST00000556432 A0A087WZ39 114 aa8.42□□□□□ -1.06
ACTN1-219ENST00000556432 H0Y9J4 135 aa8.42□□□□□ -1.06
ACTN1-219ENST00000556432 H7C423 109 aa8.42□□□□□ -1.06
ACTN1-219ENST00000556432 SS18Q15532 418 aa8.42□□□□□ -1.06
ACTN1-219ENST00000556432 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms