RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
GPHN-211ENST00000556020 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
GPHN-211ENST00000556020 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.62
GPHN-211ENST00000556020 GATCO43716 136 aaKnown RBP11.15□□□□□ -0.62
GPHN-211ENST00000556020 COTL1Q14019 142 aa11.15□□□□□ -0.62
GPHN-211ENST00000556020 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
GPHN-211ENST00000556020 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
GPHN-211ENST00000556020 TMEM250H0YL14 139 aa11.14□□□□□ -0.63
GPHN-211ENST00000556020 FOXA3P55318 350 aaPredicted RBP11.14□□□□□ -0.63
GPHN-211ENST00000556020 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
GPHN-211ENST00000556020 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
GPHN-211ENST00000556020 PGLYRP4Q96LB8 373 aa11.14□□□□□ -0.63
GPHN-211ENST00000556020 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
GPHN-211ENST00000556020 J3QL48 77 aa11.13□□□□□ -0.63
GPHN-211ENST00000556020 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
GPHN-211ENST00000556020 IGKV3OR2-268A0A0C4DH90 116 aa11.12□□□□□ -0.63
GPHN-211ENST00000556020 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
GPHN-211ENST00000556020 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
GPHN-211ENST00000556020 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
GPHN-211ENST00000556020 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
GPHN-211ENST00000556020 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
GPHN-211ENST00000556020 A8MWL6 223 aa11.1□□□□□ -0.63
GPHN-211ENST00000556020 FAM231DQ6ZW35 169 aa11.1□□□□□ -0.63
GPHN-211ENST00000556020 LYPD6BQ8NI32 183 aa11.1□□□□□ -0.63
GPHN-211ENST00000556020 SMIM7Q9BQ49 75 aa11.1□□□□□ -0.63
GPHN-211ENST00000556020 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
GPHN-211ENST00000556020 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
GPHN-211ENST00000556020 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
GPHN-211ENST00000556020 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
GPHN-211ENST00000556020 APCSP02743 223 aa11.08□□□□□ -0.64
GPHN-211ENST00000556020 RNASEKQ6P5S7 137 aaKnown RBP11.08□□□□□ -0.64
GPHN-211ENST00000556020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.07□□□□□ -0.64
GPHN-211ENST00000556020 IGKV2-29A2NJV5 120 aaPredicted RBP11.07□□□□□ -0.64
GPHN-211ENST00000556020 SDHAF1A6NFY7 115 aa11.07□□□□□ -0.64
GPHN-211ENST00000556020 TEX261Q6UWH6 196 aa11.07□□□□□ -0.64
GPHN-211ENST00000556020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
GPHN-211ENST00000556020 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
GPHN-211ENST00000556020 ZNF727A8MUV8 499 aa11.06□□□□□ -0.64
GPHN-211ENST00000556020 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
GPHN-211ENST00000556020 PANO1I0J062 215 aa11.05□□□□□ -0.64
GPHN-211ENST00000556020 NCR2O95944 276 aa11.05□□□□□ -0.64
GPHN-211ENST00000556020 PMCHP20382 165 aa11.05□□□□□ -0.64
GPHN-211ENST00000556020 KRTAP10-4P60372 401 aaPredicted RBP11.05□□□□□ -0.64
GPHN-211ENST00000556020 CT83Q5H943 113 aa11.05□□□□□ -0.64
GPHN-211ENST00000556020 LINC01551Q86U37 167 aa11.05□□□□□ -0.64
GPHN-211ENST00000556020 FAM210AQ96ND0 272 aa11.05□□□□□ -0.64
GPHN-211ENST00000556020 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
GPHN-211ENST00000556020 GAS8-AS1O95177 125 aa11.04□□□□□ -0.64
GPHN-211ENST00000556020 SRP19P09132 144 aaKnown RBP11.04□□□□□ -0.64
GPHN-211ENST00000556020 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
GPHN-211ENST00000556020 A0A1B0GUT8 65 aa11.03□□□□□ -0.64
GPHN-211ENST00000556020 A0A1B0GVG6 124 aa11.03□□□□□ -0.64
GPHN-211ENST00000556020 I3L3M4 83 aa11.03□□□□□ -0.64
GPHN-211ENST00000556020 FGF6P10767 208 aa11.03□□□□□ -0.64
GPHN-211ENST00000556020 RPL37AP61513 92 aaKnown RBP11.03□□□□□ -0.64
GPHN-211ENST00000556020 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
GPHN-211ENST00000556020 TSKUQ8WUA8 353 aa11.03□□□□□ -0.64
GPHN-211ENST00000556020 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.02□□□□□ -0.65
GPHN-211ENST00000556020 SLPIP03973 132 aa11.02□□□□□ -0.65
GPHN-211ENST00000556020 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
GPHN-211ENST00000556020 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
GPHN-211ENST00000556020 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
GPHN-211ENST00000556020 OSTCQ9NRP0 149 aa11.02□□□□□ -0.65
GPHN-211ENST00000556020 IGHV3-64A0A075B6Q5 118 aa11.01□□□□□ -0.65
GPHN-211ENST00000556020 KRTAP29-1A8MX34 341 aaPredicted RBP11.01□□□□□ -0.65
GPHN-211ENST00000556020 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
GPHN-211ENST00000556020 C15orf56Q8N910 161 aa11.01□□□□□ -0.65
GPHN-211ENST00000556020 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
GPHN-211ENST00000556020 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
GPHN-211ENST00000556020 FAM231BA6NCW3 169 aa11□□□□□ -0.65
GPHN-211ENST00000556020 H7C423 109 aa11□□□□□ -0.65
GPHN-211ENST00000556020 CHTF8P0CG12 524 aa11□□□□□ -0.65
GPHN-211ENST00000556020 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
GPHN-211ENST00000556020 CFAP161Q6P656 301 aa11□□□□□ -0.65
GPHN-211ENST00000556020 AMN1Q8IY45 258 aa11□□□□□ -0.65
GPHN-211ENST00000556020 BTF3L4Q96K17 158 aa11□□□□□ -0.65
GPHN-211ENST00000556020 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
GPHN-211ENST00000556020 TSHBP01222 138 aa10.99□□□□□ -0.65
GPHN-211ENST00000556020 RNF185Q96GF1 192 aa10.99□□□□□ -0.65
GPHN-211ENST00000556020 TMEM101Q96IK0 257 aa10.99□□□□□ -0.65
GPHN-211ENST00000556020 SMKR1H3BMG3 65 aa10.98□□□□□ -0.65
GPHN-211ENST00000556020 NDUFS6O75380 124 aaKnown RBP10.98□□□□□ -0.65
GPHN-211ENST00000556020 RAB4AP20338 218 aa10.98□□□□□ -0.65
GPHN-211ENST00000556020 MRAP2Q96G30 205 aa10.98□□□□□ -0.65
GPHN-211ENST00000556020 V9GYV3 84 aa10.98□□□□□ -0.65
GPHN-211ENST00000556020 ZNF25P17030 456 aaPredicted RBP10.97□□□□□ -0.65
GPHN-211ENST00000556020 XCL1P47992 114 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 RIGQ13278 110 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 ADIRFQ15847 76 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 TMEM241Q24JQ0 296 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 OR5A1Q8NGJ0 315 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
GPHN-211ENST00000556020 LRP1Q07954 4544 aaKnown RBP10.96□□□□□ -0.65
GPHN-211ENST00000556020 ESDP10768 282 aa10.96□□□□□ -0.65
GPHN-211ENST00000556020 HNRNPA3P51991 378 aaKnown RBP10.96□□□□□ -0.65
GPHN-211ENST00000556020 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.65
GPHN-211ENST00000556020 CCL25O15444 150 aa10.95□□□□□ -0.66
GPHN-211ENST00000556020 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms