RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TSHBP01222 138 aa8.56□□□□□ -1.04
SHMT2-221ENST00000555773 IFI27P40305 119 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-221ENST00000555773 AMTP48728 403 aa8.55□□□□□ -1.04
SHMT2-221ENST00000555773 RAB5BP61020 215 aa8.55□□□□□ -1.04
SHMT2-221ENST00000555773 PKIAP61925 76 aa8.55□□□□□ -1.04
SHMT2-221ENST00000555773 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
SHMT2-221ENST00000555773 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
SHMT2-221ENST00000555773 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 H7C423 109 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 ESDP10768 282 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 G0S2P27469 103 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 Q0VG73 95 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 Q9H8V8 135 aa8.54□□□□□ -1.04
SHMT2-221ENST00000555773 SIVA1O15304 175 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 LINC00614P0C842 121 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 LAGE3Q14657 143 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 FA2HQ7L5A8 372 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 NIT1Q86X76 327 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 DEFB104AQ8WTQ1 72 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 TMEM18Q96B42 140 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 CHCHD7Q9BUK0 85 aa8.53□□□□□ -1.04
SHMT2-221ENST00000555773 VPS13DQ5THJ4 4388 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 C1orf196B1AJZ1 125 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 K7EP13 123 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 UBE2L6O14933 153 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 SMAGPQ0VAQ4 97 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
SHMT2-221ENST00000555773 LY6G6CO95867 125 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 DNAH10OSP0CZ25 163 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 LINC01556Q5JQF7 62 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 BAGE3Q86Y29 109 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 WFDC10BQ8IUB3 73 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
SHMT2-221ENST00000555773 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
SHMT2-221ENST00000555773 TRAV9-2A0A087WT02 112 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 A0A087WX48 190 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 LINC01549A6NIU2 74 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
SHMT2-221ENST00000555773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-221ENST00000555773 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-221ENST00000555773 GAGE6Q13070 117 aa8.49□□□□□ -1.05
SHMT2-221ENST00000555773 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
SHMT2-221ENST00000555773 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
SHMT2-221ENST00000555773 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
SHMT2-221ENST00000555773 FGF6P10767 208 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-221ENST00000555773 RBX1P62877 108 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 CYSLTR1Q9Y271 337 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
SHMT2-221ENST00000555773 DNAH1Q9P2D7 4330 aa8.48□□□□□ -1.05
SHMT2-221ENST00000555773 LCE6AA0A183 80 aa8.47□□□□□ -1.05
SHMT2-221ENST00000555773 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
SHMT2-221ENST00000555773 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
SHMT2-221ENST00000555773 C2orf66Q6UXQ4 117 aa8.47□□□□□ -1.05
SHMT2-221ENST00000555773 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
SHMT2-221ENST00000555773 PYGO1Q9Y3Y4 419 aa8.47□□□□□ -1.05
SHMT2-221ENST00000555773 IGHV3-30P01768 117 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 IGHV3-33P01772 117 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 NPSP0C0P6 89 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 IGHV3-30-5P0DP03 117 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 BTF3P20290 206 aaKnown RBP8.46□□□□□ -1.06
SHMT2-221ENST00000555773 MPV17L2Q567V2 206 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 DGAT2L7PQ6IED9 249 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 TOMM6Q96B49 74 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 UBE2D4Q9Y2X8 147 aa8.46□□□□□ -1.06
SHMT2-221ENST00000555773 NBDYA0A0U1RRE5 68 aa8.45□□□□□ -1.06
SHMT2-221ENST00000555773 HSBP1O75506 76 aa8.45□□□□□ -1.06
SHMT2-221ENST00000555773 SERF1AO75920 110 aa8.45□□□□□ -1.06
SHMT2-221ENST00000555773 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
SHMT2-221ENST00000555773 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
SHMT2-221ENST00000555773 Q8N976 141 aa8.45□□□□□ -1.06
SHMT2-221ENST00000555773 ALMS1Q8TCU4 4167 aa8.44□□□□□ -1.06
SHMT2-221ENST00000555773 SACSQ9NZJ4 4579 aa8.44□□□□□ -1.06
SHMT2-221ENST00000555773 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
SHMT2-221ENST00000555773 HBDP02042 147 aa8.44□□□□□ -1.06
SHMT2-221ENST00000555773 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
SHMT2-221ENST00000555773 MRPS36P82909 103 aaKnown RBP8.44□□□□□ -1.06
SHMT2-221ENST00000555773 ERASQ7Z444 233 aa8.44□□□□□ -1.06
SHMT2-221ENST00000555773 CDC42SE2Q9NRR3 84 aa8.44□□□□□ -1.06
SHMT2-221ENST00000555773 IGLV4-60A0A075B6I1 120 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms