RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 AMTNQ6UX39 209 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 Q6ZQT7 251 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
SHMT2-216ENST00000554975 TIMM17AQ99595 171 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 CHTOPQ9Y3Y2 248 aaKnown RBP8.07□□□□□ -1.12
SHMT2-216ENST00000554975 TRBV27A0A0K0K1C4 114 aa8.06□□□□□ -1.12
SHMT2-216ENST00000554975 OR11H12B2RN74 326 aa8.06□□□□□ -1.12
SHMT2-216ENST00000554975 F5H697 171 aa8.06□□□□□ -1.12
SHMT2-216ENST00000554975 INSP01308 110 aa8.06□□□□□ -1.12
SHMT2-216ENST00000554975 OR11H2Q8NH07 326 aa8.06□□□□□ -1.12
SHMT2-216ENST00000554975 MRPL35Q9NZE8 188 aaKnown RBP8.06□□□□□ -1.12
SHMT2-216ENST00000554975 CBY3A6NI87 242 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 A8MWV9 139 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 POLR2KP53803 58 aaKnown RBP8.05□□□□□ -1.12
SHMT2-216ENST00000554975 LINC00315P59091 139 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 DEFB131AP59861 70 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 TMEM61Q8N0U2 210 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 NEXN-AS1Q8NBZ9 246 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
SHMT2-216ENST00000554975 SDHAF1A6NFY7 115 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 H3BMM0 161 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 H3BRM9 83 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 NPSP0C0P6 89 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 VAMP3Q15836 100 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 SPXQ9BT56 116 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 WFDC10AQ9H1F0 79 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 HHLA3Q9XRX5 114 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 DNAH2Q9P225 4427 aa8.04□□□□□ -1.12
SHMT2-216ENST00000554975 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
SHMT2-216ENST00000554975 IGKV3-20P01619 116 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 PMVKQ15126 192 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 ZNF124Q15973 351 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 ZNF876PQ49A33 203 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 FAM74A4Q5TZK3 123 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 GTF2H5Q6ZYL4 71 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 BAALCQ8WXS3 180 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 TP53TG1Q9Y2A0 90 aa8.03□□□□□ -1.12
SHMT2-216ENST00000554975 TRAV12-2A0A075B6T6 113 aa8.02□□□□□ -1.13
SHMT2-216ENST00000554975 M0R2P5 195 aa8.02□□□□□ -1.13
SHMT2-216ENST00000554975 OR4C5Q8NGB2 326 aa8.02□□□□□ -1.13
SHMT2-216ENST00000554975 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 A0A087WWL8 130 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 E9PLD3 99 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 I3L3M4 83 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 M0QY20 66 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 CRYBA4P53673 196 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 PCP2Q8IVA1 136 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 TP73-AS1Q9UF72 201 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 AGRNO00468 2067 aa8.01□□□□□ -1.13
SHMT2-216ENST00000554975 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 TRBV25-1A0A075B6N4 114 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 NUPR2A6NF83 97 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 C9orf118A6NHY6 69 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 A6NJY4 79 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 KNCNA6PVL3 124 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 CRYGDP07320 174 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 CEMP1Q6PRD7 247 aaPredicted RBP8□□□□□ -1.13
SHMT2-216ENST00000554975 DNAJC30Q96LL9 226 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 MDFICQ9P1T7 246 aa8□□□□□ -1.13
SHMT2-216ENST00000554975 IGKV2D-26A0A0A0MRZ7 120 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 PRSS29PA6NIE9 313 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 C11orf86A6NJI1 115 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 SMIM13P0DJ93 91 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 GCSHP23434 173 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 STHQ8IWL8 128 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 OVOL2Q9BRP0 275 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 TM2D2Q9BX73 214 aa7.99□□□□□ -1.13
SHMT2-216ENST00000554975 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
SHMT2-216ENST00000554975 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
SHMT2-216ENST00000554975 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
SHMT2-216ENST00000554975 CEND1Q8N111 149 aa7.98□□□□□ -1.13
SHMT2-216ENST00000554975 TRAV8-6A0A0B4J262 113 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 A0A0J9YWU9 116 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 SPRY2O43597 315 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 NFE4Q86UQ8 179 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 C20orf203Q8NBC4 194 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 PRADC1Q9BSG0 188 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 JPT2Q9H910 190 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
SHMT2-216ENST00000554975 PKD1P98161 4303 aa7.96□□□□□ -1.13
SHMT2-216ENST00000554975 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 LYRM7Q5U5X0 104 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 LINC01587Q99440 93 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 HIST1H4GQ99525 98 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 C1QTNF4Q9BXJ3 329 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 SPANXA1Q9NS26 97 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 TNFRSF18Q9Y5U5 241 aa7.96□□□□□ -1.14
SHMT2-216ENST00000554975 NACAE9PAV3 2078 aa7.95□□□□□ -1.14
SHMT2-216ENST00000554975 HSPG2P98160 4391 aa7.95□□□□□ -1.14
SHMT2-216ENST00000554975 GAGE10A6NGK3 116 aa7.95□□□□□ -1.14
SHMT2-216ENST00000554975 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms