RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ZNF138P52744 262 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 GAGE1Q13065 139 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 TDRG1Q3Y452 100 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 SPATA45Q537H7 98 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 COL5A1-AS1Q5SY13 56 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 LINC01545Q5VT33 79 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 LYZL1Q6UWQ5 148 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 ZNF705AQ6ZN79 300 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-226ENST00000554350 FAM19A2Q8N3H0 131 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 FER1L6-AS1Q8NA97 138 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 OR10AG1Q8NH19 301 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 ZNRF2Q8NHG8 242 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 PMCHL2Q9BQD1 86 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 PAM16Q9Y3D7 125 aa3.92□□□□□ -1.78
ATXN3-226ENST00000554350 A0A1B0GV90 55 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 HSBP1L1C9JCN9 74 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 SNAI2O43623 268 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 EMP1P54849 157 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 CACNG7P62955 275 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 TTC32Q5I0X7 151 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 TMEM78Q5T7P6 136 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 CLEC19AQ6UXS0 136 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 FA2HQ7L5A8 372 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 GPHB5Q86YW7 130 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 PRELID3AQ96N28 172 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 NXT2Q9NPJ8 142 aaKnown RBP3.91□□□□□ -1.78
ATXN3-226ENST00000554350 S4R3C0 116 aa3.91□□□□□ -1.78
ATXN3-226ENST00000554350 FAT1Q14517 4588 aa3.9□□□□□ -1.78
ATXN3-226ENST00000554350 IGKV3-7A0A075B6H7 116 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 IGKV2-40A0A087WW87 121 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-226ENST00000554350 TRAV8-2A0A0B4J237 113 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 IGHV3-35A0A0C4DH35 117 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 LINC01549A6NIU2 74 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 K7EMI3 77 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 TCAPO15273 167 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 IGKV2D-40P01614 121 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-226ENST00000554350 SPART-AS1P0CW21 52 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 TSPOP30536 169 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 ZNF80P51504 273 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-226ENST00000554350 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.79
ATXN3-226ENST00000554350 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 MRPL51Q4U2R6 128 aaKnown RBP3.9□□□□□ -1.79
ATXN3-226ENST00000554350 SMIM15Q7Z3B0 74 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 VGLL1Q99990 258 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 AGPAT4-IT1Q9H0P7 198 aa3.9□□□□□ -1.79
ATXN3-226ENST00000554350 D6R8Y8 96 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 SOCS3O14543 225 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 SIVA1O15304 175 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 DLEU1O43261 78 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 PPP1R17O96001 155 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 HBDP02042 147 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 ORM1P02763 201 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 CKS2P33552 79 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 CCL18P55774 89 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 CMC4P56277 68 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-226ENST00000554350 UNQ9165/PRO28630Q6UXU0 137 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 Q6ZN92 141 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 STHQ8IWL8 128 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 RNF185Q96GF1 192 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 FAM19A4Q96LR4 140 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 ODF3Q96PU9 254 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 C1QTNF4Q9BXJ3 329 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 MAP1LC3AQ9H492 121 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 SMPXQ9UHP9 88 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 UFC1Q9Y3C8 167 aa3.89□□□□□ -1.79
ATXN3-226ENST00000554350 A0A096LNJ9 63 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 TRAV21A0A0B4J279 112 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 IGHV7-4-1A0A0J9YVY3 117 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 PRAC2D3DTV9 90 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 FCER1GP30273 86 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 IFI27P40305 119 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-226ENST00000554350 LELP1Q5T871 98 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 MORN3Q6PF18 240 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-226ENST00000554350 SLC25A34Q6PIV7 304 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 AMN1Q8IY45 258 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 Q8N8P6 123 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 OR10J6PQ8NGY7 276 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 Q9H8V8 135 aa3.88□□□□□ -1.79
ATXN3-226ENST00000554350 DAZ1Q9NQZ3 744 aaKnown RBP3.88□□□□□ -1.79
ATXN3-226ENST00000554350 MUC2Q02817 5179 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 M0R381 172 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 ATP5LO75964 103 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 PRSS2P07478 247 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 DNAH10OSP0CZ25 163 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 COX8AP10176 69 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 HLA-DRB4P13762 266 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 G0S2P27469 103 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 ID1P41134 155 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 RPL32P62910 135 aaKnown RBP3.87□□□□□ -1.79
ATXN3-226ENST00000554350 LRP2P98164 4655 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 ERCC8Q13216 396 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 ZFAND2AQ8N6M9 145 aa3.87□□□□□ -1.79
ATXN3-226ENST00000554350 Q8TAT8 98 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms