RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RNF24Q9Y225 148 aa1.88□□□□□ -2.11
SLIRP-202ENST00000553981 HSPB11Q9Y547 144 aa1.88□□□□□ -2.11
SLIRP-202ENST00000553981 TRBV7-3A0A075B6L6 115 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 A0A087WWC5 75 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 A0A0D9SG52 128 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 A8MWV9 139 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 M0R381 172 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 SH2D1AO60880 128 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 GCHFRP30047 84 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 FGF8P55075 233 aaPredicted RBP1.87□□□□□ -2.11
SLIRP-202ENST00000553981 Q0VG73 95 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 ZNF674Q2M3X9 581 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 MAJINQ3KP22 176 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 SMUG1Q53HV7 270 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 KHDC3LQ587J8 217 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 SPINK6Q6UWN8 80 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 ARL6IP6Q8N6S5 226 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 OR10AG1Q8NH19 301 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 GTSF1Q8WW33 167 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 RMI2Q96E14 147 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 ATP5SQ99766 215 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 SH3BGRL3Q9H299 93 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 PRO0461Q9UI25 63 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 VAX2Q9UIW0 290 aa1.87□□□□□ -2.11
SLIRP-202ENST00000553981 IGHV3-64A0A075B6Q5 118 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 A0A087WX48 190 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 PIGBOS1A0A0B4J2F0 54 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 TRBV6-1A0A0K0K1D8 114 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 FABP5P3A8MUU1 101 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 B4DEV8 164 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 G3V3Q6 166 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 SNAI2O43623 268 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 NDUFS6O75380 124 aaKnown RBP1.86□□□□□ -2.11
SLIRP-202ENST00000553981 MPC2O95563 127 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 ATP6V0CP27449 155 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 UBE2G2P60604 165 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 SSTP61278 116 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 SNRPEP62304 92 aaKnown RBP1.86□□□□□ -2.11
SLIRP-202ENST00000553981 HBG1P69891 147 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 HBG2P69892 147 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 REG3AQ06141 175 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 GAGE2BQ13066 116 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 MIAQ16674 131 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 GAGE2EQ4V326 116 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 TRIQKQ629K1 86 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 GAGE2AQ6NT46 116 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 PHF5AQ7RTV0 110 aaKnown RBP1.86□□□□□ -2.11
SLIRP-202ENST00000553981 COX8CQ7Z4L0 72 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 Q86TA4 180 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 STX12Q86Y82 276 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 C5orf17Q8NAS9 161 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 OR10G9Q8NGN4 311 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 CMTM2Q8TAZ6 248 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 PPP1R1CQ8WVI7 109 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 GAGE2DQ9UEU5 116 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 PSORS1C2Q9UIG4 136 aa1.86□□□□□ -2.11
SLIRP-202ENST00000553981 TRBV10-1A0A0K0K1A3 114 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 FAM74A7A6NL05 159 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 M0QY20 66 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 PEX7O00628 323 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 BCL2L11O43521 198 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 CRPP02741 224 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 GZMBP10144 247 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 PVALBP20472 110 aaPredicted RBP1.85□□□□□ -2.11
SLIRP-202ENST00000553981 S100A4P26447 101 aaKnown RBP1.85□□□□□ -2.11
SLIRP-202ENST00000553981 RPL12P30050 165 aaKnown RBP1.85□□□□□ -2.11
SLIRP-202ENST00000553981 S100A5P33763 92 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 CDC34P49427 236 aaPredicted RBP1.85□□□□□ -2.11
SLIRP-202ENST00000553981 DEFA1P59665 94 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 RAB4BP61018 213 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 ELOBQ15370 118 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 IQCJQ1A5X6 159 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 OR11H4Q8NGC9 324 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 RNF185Q96GF1 192 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 CHCHD5Q9BSY4 110 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 DERL1Q9BUN8 251 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 URGCP-MRPS24S4R325 110 aa1.85□□□□□ -2.11
SLIRP-202ENST00000553981 GVQW2A0A096LPI5 108 aaPredicted RBP1.84□□□□□ -2.11
SLIRP-202ENST00000553981 IGKV3OR2-268A0A0C4DH90 116 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 A0A1W2PRE2 83 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 FAM168BA1KXE4 195 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 FAM231BA6NCW3 169 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 C17orf112F2Z3M2 114 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 INMT-MINDY4F8WBC2 141 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 LTAP01374 205 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 BCL2P10415 239 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 RPS10P46783 165 aaKnown RBP1.84□□□□□ -2.11
SLIRP-202ENST00000553981 FHITP49789 147 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 NKX2-5P52952 324 aaPredicted RBP1.84□□□□□ -2.11
SLIRP-202ENST00000553981 FOXA3P55318 350 aaPredicted RBP1.84□□□□□ -2.11
SLIRP-202ENST00000553981 TAS2R45P59539 299 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 ZNF56Q15929 161 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 HSD17B11Q8NBQ5 300 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 FAM104AQ969W3 186 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 DPH3Q96FX2 82 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 CYTL1Q9NRR1 136 aa1.84□□□□□ -2.11
SLIRP-202ENST00000553981 PHLDA3Q9Y5J5 127 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms