RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
SHMT2-205ENST00000553474 ZNF418Q8TF45 676 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-205ENST00000553474 VCX2Q9H322 139 aa9.44□□□□□ -0.9
SHMT2-205ENST00000553474 TNFRSF18Q9Y5U5 241 aa9.44□□□□□ -0.9
SHMT2-205ENST00000553474 A0A0J9YY99 117 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
SHMT2-205ENST00000553474 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
SHMT2-205ENST00000553474 DNAJC9-AS1A6NH13 148 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
SHMT2-205ENST00000553474 UBE2D1P51668 147 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 FHL3Q13643 280 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 Q6ZSV7 163 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 SLC25A29Q8N8R3 303 aa9.43□□□□□ -0.9
SHMT2-205ENST00000553474 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-205ENST00000553474 J3QQQ9 107 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 LEPROTO15243 131 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
SHMT2-205ENST00000553474 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-205ENST00000553474 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 JMJD1CQ15652 2540 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 SETD2Q9BYW2 2564 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-205ENST00000553474 NIPBLQ6KC79 2804 aaeCLIP9.42□□□□□ -0.9
SHMT2-205ENST00000553474 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 AMELXQ99217 191 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 SPANXA1Q9NS26 97 aa9.42□□□□□ -0.9
SHMT2-205ENST00000553474 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 CUBNO60494 3623 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 A0A1B0GV72 72 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 IGHV3-53P01767 116 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 CFAP126Q5VTH2 177 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 LINC01587Q99440 93 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 ESM1Q9NQ30 184 aa9.41□□□□□ -0.9
SHMT2-205ENST00000553474 G3V4G9 280 aa9.4□□□□□ -0.9
SHMT2-205ENST00000553474 SCGB1A1P11684 91 aa9.4□□□□□ -0.9
SHMT2-205ENST00000553474 HTN1P15515 57 aa9.4□□□□□ -0.9
SHMT2-205ENST00000553474 ZNF22P17026 224 aaPredicted RBP9.4□□□□□ -0.91
SHMT2-205ENST00000553474 EMP1P54849 157 aa9.4□□□□□ -0.91
SHMT2-205ENST00000553474 HILS1P60008 231 aa9.4□□□□□ -0.91
SHMT2-205ENST00000553474 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.91
SHMT2-205ENST00000553474 RS1O15537 224 aa9.39□□□□□ -0.91
SHMT2-205ENST00000553474 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
SHMT2-205ENST00000553474 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
SHMT2-205ENST00000553474 CD28P10747 220 aa9.38□□□□□ -0.91
SHMT2-205ENST00000553474 STHQ8IWL8 128 aa9.38□□□□□ -0.91
SHMT2-205ENST00000553474 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
SHMT2-205ENST00000553474 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
SHMT2-205ENST00000553474 J3QR89 54 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 CCL24O00175 119 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-205ENST00000553474 NF1P21359 2839 aa9.37□□□□□ -0.91
SHMT2-205ENST00000553474 C2CD3Q4AC94 2353 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 SAP30O75446 220 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 GAGE13Q4V321 117 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 IL17DQ8TAD2 202 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 DEFB104AQ8WTQ1 72 aa9.36□□□□□ -0.91
SHMT2-205ENST00000553474 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-205ENST00000553474 TRBV20-1A0A075B6N2 111 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 IGHV3-73A0A0B4J1V6 119 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 A0A0J9YXV3 536 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
SHMT2-205ENST00000553474 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
SHMT2-205ENST00000553474 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 TRBV10-1A0A0K0K1A3 114 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 H3BMG7 143 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
SHMT2-205ENST00000553474 TSPAN13O95857 204 aa9.34□□□□□ -0.91
SHMT2-205ENST00000553474 PROK1P58294 105 aa9.34□□□□□ -0.91
SHMT2-205ENST00000553474 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
SHMT2-205ENST00000553474 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
SHMT2-205ENST00000553474 FAM104AQ969W3 186 aa9.34□□□□□ -0.91
SHMT2-205ENST00000553474 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-205ENST00000553474 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
SHMT2-205ENST00000553474 IGHV3-30-3P0DP02 117 aa9.33□□□□□ -0.92
SHMT2-205ENST00000553474 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
SHMT2-205ENST00000553474 A0A0B4J2C4 111 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 CFC1P0CG37 223 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 Q6ZSN1 163 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 XCL2Q9UBD3 114 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 APOMO95445 188 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 AZU1P20160 251 aa9.32□□□□□ -0.92
SHMT2-205ENST00000553474 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms