RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RAB4BP61018 213 aa7.93□□□□□ -1.14
CKAP4-202ENST00000552828 IGLV5-52A0A0A0MRZ9 124 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 IGHV3-38A0A0C4DH36 116 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 F5H697 171 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 NTF3P20783 257 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 CTRLP40313 264 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 ZNF56Q15929 161 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 LINC01556Q5JQF7 62 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 GTSF1Q8WW33 167 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
CKAP4-202ENST00000552828 TRBV10-1A0A0K0K1A3 114 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 GAGE12JA6NER3 117 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 GAGE1Q13065 139 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 GAGE4Q13068 117 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 GAGE5Q13069 117 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 JOSD1Q15040 202 aaPredicted RBP7.91□□□□□ -1.14
CKAP4-202ENST00000552828 TWIST1Q15672 202 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 GAGE13Q4V321 117 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 Q8N814 137 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 OR10G8Q8NGN5 311 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 ATP6V0E2Q8NHE4 81 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 TSKUQ8WUA8 353 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 PACRGQ96M98 296 aaPredicted RBP7.91□□□□□ -1.14
CKAP4-202ENST00000552828 CNFNQ9BYD5 112 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 KIF25-AS1Q9Y6Z4 181 aa7.91□□□□□ -1.14
CKAP4-202ENST00000552828 FAM231BA6NCW3 169 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 PSCAO43653 123 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 FABP4P15090 132 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 FOXA3P55318 350 aaPredicted RBP7.9□□□□□ -1.14
CKAP4-202ENST00000552828 HAMPP81172 84 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 COX19Q49B96 90 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 BORCS7Q96B45 105 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 PGLYRP4Q96LB8 373 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 GFRA4Q9GZZ7 299 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 GTSF1LQ9H1H1 148 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 Q9UF83 564 aa7.9□□□□□ -1.14
CKAP4-202ENST00000552828 LINC00694P0DN24 101 aa7.89□□□□□ -1.15
CKAP4-202ENST00000552828 PKIAP61925 76 aa7.89□□□□□ -1.15
CKAP4-202ENST00000552828 RPL36AP83881 106 aaKnown RBP7.89□□□□□ -1.15
CKAP4-202ENST00000552828 SMIM15Q7Z3B0 74 aa7.89□□□□□ -1.15
CKAP4-202ENST00000552828 RPL36ALQ969Q0 106 aaKnown RBP7.89□□□□□ -1.15
CKAP4-202ENST00000552828 TMEM18Q96B42 140 aa7.89□□□□□ -1.15
CKAP4-202ENST00000552828 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
CKAP4-202ENST00000552828 V9GYV3 84 aa7.89□□□□□ -1.15
CKAP4-202ENST00000552828 TRBV7-3A0A075B6L6 115 aa7.88□□□□□ -1.15
CKAP4-202ENST00000552828 TRAV8-6A0A0B4J262 113 aa7.88□□□□□ -1.15
CKAP4-202ENST00000552828 HIGD1CA8MV81 97 aa7.88□□□□□ -1.15
CKAP4-202ENST00000552828 MGPP08493 103 aa7.88□□□□□ -1.15
CKAP4-202ENST00000552828 DPH3P1Q9H4G8 78 aa7.88□□□□□ -1.15
CKAP4-202ENST00000552828 TRAPPC1Q9Y5R8 145 aa7.88□□□□□ -1.15
CKAP4-202ENST00000552828 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 A0A1B0GUT8 65 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 H7C1H1 209 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 LAGE3Q14657 143 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 PDZD11Q5EBL8 140 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 OR10J3Q5JRS4 329 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 LELP1Q5T871 98 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 Q6ZSA8 131 aa7.87□□□□□ -1.15
CKAP4-202ENST00000552828 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
CKAP4-202ENST00000552828 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 J3QL48 77 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 M0QY20 66 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 ESDP10768 282 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 UBE2D3P61077 147 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 UBE2D2P62837 147 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 SUMO4Q6EEV6 95 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 NEXN-AS1Q8NBZ9 246 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 NAT8BQ9UHF3 227 aa7.86□□□□□ -1.15
CKAP4-202ENST00000552828 MT-ND6P03923 174 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 RIGQ13278 110 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 NUP35Q8NFH5 326 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 DNAJC30Q96LL9 226 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 TM2D2Q9BX73 214 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 GNB1LQ9BYB4 327 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 Q9HAA7 133 aa7.85□□□□□ -1.15
CKAP4-202ENST00000552828 LRP1Q07954 4544 aaKnown RBP7.85□□□□□ -1.15
CKAP4-202ENST00000552828 SMIM27A0A1W2PRY6 76 aa7.84□□□□□ -1.15
CKAP4-202ENST00000552828 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
CKAP4-202ENST00000552828 RASL11AQ6T310 242 aa7.84□□□□□ -1.15
CKAP4-202ENST00000552828 IGHV3-30P01768 117 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 IGHV3-33P01772 117 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 IGHV3-30-5P0DP03 117 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 Q0VG73 95 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 WFDC2Q14508 124 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 IQCJQ1A5X6 159 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 DAZ4Q86SG3 579 aaKnown RBP7.83□□□□□ -1.16
CKAP4-202ENST00000552828 TMEM191AQ9H0A3 160 aa7.83□□□□□ -1.16
CKAP4-202ENST00000552828 DAZ3Q9NR90 486 aaKnown RBP7.83□□□□□ -1.16
CKAP4-202ENST00000552828 DDTP30046 118 aa7.82□□□□□ -1.16
CKAP4-202ENST00000552828 LBHQ53QV2 105 aaPredicted RBP7.82□□□□□ -1.16
CKAP4-202ENST00000552828 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
CKAP4-202ENST00000552828 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
CKAP4-202ENST00000552828 DEFB104AQ8WTQ1 72 aa7.82□□□□□ -1.16
CKAP4-202ENST00000552828 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
CKAP4-202ENST00000552828 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
CKAP4-202ENST00000552828 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
CKAP4-202ENST00000552828 A0A1B0GW15 77 aa7.81□□□□□ -1.16
CKAP4-202ENST00000552828 GATD1Q8NB37 220 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms