RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 ZNF791Q3KP31 576 aaPredicted RBP2.51□□□□□ -2.01
USP44-208ENST00000552440 MRPL35Q9NZE8 188 aaKnown RBP2.51□□□□□ -2.01
USP44-208ENST00000552440 GVINP1Q7Z2Y8 2422 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 TRAV10A0A0B4J240 114 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 TCRBV4S1A1TA0A5B7 111 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 ODF3BA8MYP8 253 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 NUPR1O60356 82 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 ERC2-IT1O76042 136 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 ASAH2BP0C7U1 165 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 P0C880 135 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 FAUP35544 74 aaKnown RBP2.5□□□□□ -2.01
USP44-208ENST00000552440 POLR2JP52435 117 aaKnown RBP2.5□□□□□ -2.01
USP44-208ENST00000552440 KRTDAPP60985 99 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 DEFA5Q01523 94 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 DEFB113Q30KQ7 82 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 ZCCHC23Q6ZST2 131 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 RABAC1Q9UI14 185 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 R4GN34 69 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 COL4A6Q14031 1691 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 DOCK1Q14185 1865 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 USP24Q9UPU5 2620 aa2.5□□□□□ -2.01
USP44-208ENST00000552440 A6NIN4 97 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 PDCD5O14737 125 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 MGAMO43451 1857 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 IGKV3-11P04433 115 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 CCL8P80075 99 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 MYO9BQ13459 2157 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 PRRC2BQ5JSZ5 2229 aaKnown RBP2.49□□□□□ -2.01
USP44-208ENST00000552440 SLC48A1Q6P1K1 146 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 WDR87Q6ZQQ6 2873 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 LINC00299Q6ZSB3 139 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 PLIN4Q96Q06 1357 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 KIAA1549Q9HCM3 1950 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 LINC00474Q9P2X8 69 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 LHFPL6Q9Y693 200 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 KIF20BQ96Q89 1820 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 BPTFQ12830 3046 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 TMSB15BA0A087X1C1 80 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 MDKP21741 143 aaPredicted RBP2.49□□□□□ -2.01
USP44-208ENST00000552440 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
USP44-208ENST00000552440 RPL7L1Q6DKI1 246 aaKnown RBP2.49□□□□□ -2.01
USP44-208ENST00000552440 Q8TAT8 98 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 FAM213BQ8TBF2 198 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 MGST2Q99735 147 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 CYTL1Q9NRR1 136 aa2.49□□□□□ -2.01
USP44-208ENST00000552440 TECTAO75443 2155 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 SCN3AQ9NY46 2000 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 SPEGQ15772 3267 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 TRAV17A0A0B4J275 112 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 CXCL8P10145 99 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 PRB4P10163 310 aaPredicted RBP2.48□□□□□ -2.01
USP44-208ENST00000552440 ERHP84090 104 aaKnown RBP2.48□□□□□ -2.01
USP44-208ENST00000552440 ADIRFQ15847 76 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 MYOZ3Q8TDC0 251 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 MAP1BP46821 2468 aaKnown RBP2.48□□□□□ -2.01
USP44-208ENST00000552440 COL4A1P02462 1669 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 PLXNA1Q9UIW2 1896 aa2.48□□□□□ -2.01
USP44-208ENST00000552440 SIPA1L3O60292 1781 aaPredicted RBP2.47□□□□□ -2.01
USP44-208ENST00000552440 FRYLO94915 3013 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 TRAV12-1A0A0B4J245 112 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 NAP1L6A6NFF2 107 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 GNG11P61952 73 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 SEC11AP67812 179 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 SPINK14Q6IE38 97 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 C2orf82Q6UX34 121 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 PPDPFLQ8WWR9 84 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 ST20Q9HBF5 79 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 PSORS1C2Q9UIG4 136 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 MYH8P13535 1937 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 GCN1Q92616 2671 aaKnown RBP2.47□□□□□ -2.01
USP44-208ENST00000552440 ANK1P16157 1881 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 ZZEF1O43149 2961 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 NAV2Q8IVL1 2488 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 A0A0G2JMZ2 1700 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 LOC730098B7Z3J9 87 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 H3BRM9 83 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 RNASE2P10153 161 aaKnown RBP2.47□□□□□ -2.01
USP44-208ENST00000552440 HINT1P49773 126 aaPredicted RBP2.47□□□□□ -2.01
USP44-208ENST00000552440 KRTAP26-1Q6PEX3 210 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 SERP2Q8N6R1 65 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 SPTSSBQ8NFR3 76 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 NDUFB11Q9NX14 153 aa2.47□□□□□ -2.01
USP44-208ENST00000552440 EP300Q09472 2414 aaPredicted RBP2.46□□□□□ -2.01
USP44-208ENST00000552440 PLXNA2O75051 1894 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 IGKV3-15P01624 115 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 ZNF833PQ6ZTB9 187 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 CLECL1Q8IZS7 167 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 Q9BRP9 147 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 CACFD1Q9UGQ2 172 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 SPCS1Q9Y6A9 102 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
USP44-208ENST00000552440 SMG1Q96Q15 3661 aaKnown RBP2.46□□□□□ -2.02
USP44-208ENST00000552440 FRYQ5TBA9 3013 aa2.45□□□□□ -2.02
USP44-208ENST00000552440 TRAV13-2A0A0B4J235 113 aa2.45□□□□□ -2.02
USP44-208ENST00000552440 TRBV10-3A0A0K0K1G6 114 aa2.45□□□□□ -2.02
USP44-208ENST00000552440 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
USP44-208ENST00000552440 CCL16O15467 120 aa2.45□□□□□ -2.02
USP44-208ENST00000552440 KRTAP13-3Q3SY46 172 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms