RNA–Protein interactions for RNA: ENST00000552294.1

CTDSP2-208, Transcript of CTD small phosphatase 2, humanhuman

TSL 5

Gene CTDSP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-208ENST00000552294 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
CTDSP2-208ENST00000552294 RPL7L1Q6DKI1 246 aaKnown RBP4.04□□□□□ -1.76
CTDSP2-208ENST00000552294 Q6ZNX1 250 aa4.04□□□□□ -1.76
CTDSP2-208ENST00000552294 TMEM243Q9BU79 118 aa4.04□□□□□ -1.76
CTDSP2-208ENST00000552294 MLST8Q9BVC4 326 aa4.04□□□□□ -1.76
CTDSP2-208ENST00000552294 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
CTDSP2-208ENST00000552294 TRAV26-2A0A0B4J265 109 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 TMEM238LA0A1B0GVL6 79 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 FAM231BA6NCW3 169 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 INMT-MINDY4F8WBC2 141 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 TSPAN13O95857 204 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 SULT1A2P50226 295 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 PTTG1IPP53801 180 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 GAGE2BQ13066 116 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 C1orf137Q5JT78 98 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 TMEM167BQ9NRX6 74 aa4.03□□□□□ -1.76
CTDSP2-208ENST00000552294 OR5AL1P0C617 328 aa4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 IGLC6P0CF74 106 aa4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 XCL1P47992 114 aa4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 AMTP48728 403 aa4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 C9orf116Q5BN46 136 aaPredicted RBP4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 ZNF664Q8N3J9 261 aa4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 RPL39LQ96EH5 51 aaKnown RBP4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 OPRPNQ99935 248 aaPredicted RBP4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 PSMG3Q9BT73 122 aaPredicted RBP4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 ACTR3CQ9C0K3 210 aaPredicted RBP4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 ZFP30Q9Y2G7 519 aa4.02□□□□□ -1.77
CTDSP2-208ENST00000552294 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 A0A1B0GV50 99 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 CCL25O15444 150 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 MT-ND6P03923 174 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 IGLV7-43P04211 117 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 CACNG7P62955 275 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 CYCSP99999 105 aaKnown RBP4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 MEF2BQ02080 365 aaPredicted RBP4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 GATD1Q8NB37 220 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 CARD19Q96LW7 228 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 MARVELD1Q9BSK0 173 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 TNFSF18Q9UNG2 199 aa4.01□□□□□ -1.77
CTDSP2-208ENST00000552294 CTXND1A0A1B0GTU2 59 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 G3V3Q6 166 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 H0Y9J4 135 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 SSNA1O43805 119 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 PAGE4O60829 102 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 UBE2G1P62253 170 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 HIST1H2BAQ96A08 127 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 CCDC32Q9BV29 185 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 TPPP3Q9BW30 176 aa4□□□□□ -1.77
CTDSP2-208ENST00000552294 A0A087X002 238 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 LINC00959A0A1B0GUT2 108 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 MAP1LC3B2A6NCE7 125 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 FGF6P10767 208 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 NTF3P20783 257 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 PKIAP61925 76 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 SYCNQ0VAF6 134 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 TMEM97Q5BJF2 176 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 RNASE13Q5GAN3 156 aaKnown RBP3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 C10orf25Q5T742 122 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 CST9LP1Q5W188 147 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 RASL11AQ6T310 242 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 NUP35Q8NFH5 326 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 ENKURQ8TC29 256 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 PGLYRP4Q96LB8 373 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 MAP1LC3BQ9GZQ8 125 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 CYTL1Q9NRR1 136 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
CTDSP2-208ENST00000552294 UPK1BO75841 260 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 CXCL1P09341 107 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 AKR1C3P42330 323 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 CCL20P78556 96 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 SERF2P84101 59 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 MZT2BQ6NZ67 158 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 RNASEKQ6P5S7 137 aaKnown RBP3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 CFAP161Q6P656 301 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 LYZL1Q6UWQ5 148 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 BAGE2Q86Y30 109 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 AP1S3Q96PC3 154 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 RNASE7Q9H1E1 156 aaKnown RBP3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 NIT2Q9NQR4 276 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 ALG5Q9Y673 324 aa3.98□□□□□ -1.77
CTDSP2-208ENST00000552294 RAB19A4D1S5 217 aa3.97□□□□□ -1.77
CTDSP2-208ENST00000552294 CAMPP49913 170 aa3.97□□□□□ -1.77
CTDSP2-208ENST00000552294 FAM104AQ969W3 186 aa3.97□□□□□ -1.77
CTDSP2-208ENST00000552294 TRBV20OR9-2A0A075B6H5 130 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 A0A087WZ39 114 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 IGHV1-58A0A0C4DH39 117 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 A0A0U1RQV1 116 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 C19orf71A6NCJ1 209 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 UBE2L6O14933 153 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 TSHBP01222 138 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 MBP02144 154 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 SMIM17P0DL12 118 aa3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
CTDSP2-208ENST00000552294 COTL1Q14019 142 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms