RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TRAV8-4A0A0B4J246 113 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 H7C1H1 209 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 PHOX2AO14813 284 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 P01737 135 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 CACNG7P62955 275 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 GATD1Q8NB37 220 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 DPH3Q96FX2 82 aa7.29□□□□□ -1.24
PRPF40B-212ENST00000551111 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 IFNA1P01562 189 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 AMTP48728 403 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 GNG4P50150 75 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 RPS20P60866 119 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 COX6A2Q02221 97 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 Q6ZNX1 250 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 Q6ZRU5 148 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 C9orf62Q8N4C0 152 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 RPL39LQ96EH5 51 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 NUDT11Q96G61 164 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 PGLYRP4Q96LB8 373 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 DPH3P1Q9H4G8 78 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
PRPF40B-212ENST00000551111 F2Z2F3 143 aa7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 K7EN84 100 aa7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 CTRLP40313 264 aa7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 MEF2BQ02080 365 aaPredicted RBP7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 RNASE7Q9H1E1 156 aaKnown RBP7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 AP5S1Q9NUS5 200 aa7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 MED9Q9NWA0 146 aa7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 PLAC8Q9NZF1 115 aa7.27□□□□□ -1.25
PRPF40B-212ENST00000551111 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 IGKV2-29A2NJV5 120 aaPredicted RBP7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 TRGC1P0CF51 173 aa7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 SULT1A2P50226 295 aa7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 COTL1Q14019 142 aa7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 LINC00526Q96FQ7 95 aa7.26□□□□□ -1.25
PRPF40B-212ENST00000551111 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 IGKV2-24A0A0C4DH68 120 aa7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 UBE2L6O14933 153 aa7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 TWIST1Q15672 202 aa7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 OCC1Q8TAD7 63 aa7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 GTSF1Q8WW33 167 aa7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 RNF185Q96GF1 192 aa7.25□□□□□ -1.25
PRPF40B-212ENST00000551111 FAM231BA6NCW3 169 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 BCL2P10415 239 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 RPS10P46783 165 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 EIF5AP63241 154 aaKnown RBP7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 MAJINQ3KP22 176 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 LYPD6BQ8NI32 183 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 SMIM12Q96EX1 92 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 CNFNQ9BYD5 112 aa7.24□□□□□ -1.25
PRPF40B-212ENST00000551111 A0A096LNI7 61 aa7.23□□□□□ -1.25
PRPF40B-212ENST00000551111 XKRY2A2RUG3 117 aa7.23□□□□□ -1.25
PRPF40B-212ENST00000551111 PDE6DO43924 150 aa7.23□□□□□ -1.25
PRPF40B-212ENST00000551111 FOXI1Q12951 378 aa7.23□□□□□ -1.25
PRPF40B-212ENST00000551111 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-212ENST00000551111 NDUFS6O75380 124 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-212ENST00000551111 FGF6P10767 208 aa7.22□□□□□ -1.25
PRPF40B-212ENST00000551111 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-212ENST00000551111 STPG4Q8N801 248 aa7.22□□□□□ -1.25
PRPF40B-212ENST00000551111 GVQW2A0A096LPI5 108 aaPredicted RBP7.21□□□□□ -1.26
PRPF40B-212ENST00000551111 SDHAF1A6NFY7 115 aa7.21□□□□□ -1.26
PRPF40B-212ENST00000551111 PRR3P79522 188 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-212ENST00000551111 AMMECR1LQ6DCA0 310 aa7.21□□□□□ -1.26
PRPF40B-212ENST00000551111 XCL1P47992 114 aa7.2□□□□□ -1.26
PRPF40B-212ENST00000551111 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
PRPF40B-212ENST00000551111 LINC01600Q96MT4 127 aa7.2□□□□□ -1.26
PRPF40B-212ENST00000551111 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 TSHBP01222 138 aa7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 APCSP02743 223 aa7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 C7orf33Q8WU49 177 aa7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 BIN3Q9NQY0 253 aa7.19□□□□□ -1.26
PRPF40B-212ENST00000551111 CCL25O15444 150 aa7.18□□□□□ -1.26
PRPF40B-212ENST00000551111 NCR2O95944 276 aa7.18□□□□□ -1.26
PRPF40B-212ENST00000551111 ESDP10768 282 aa7.18□□□□□ -1.26
PRPF40B-212ENST00000551111 EIF5AL1Q6IS14 154 aaKnown RBP7.18□□□□□ -1.26
PRPF40B-212ENST00000551111 OR5A1Q8NGJ0 315 aa7.18□□□□□ -1.26
PRPF40B-212ENST00000551111 TMEM242Q9NWH2 141 aa7.18□□□□□ -1.26
PRPF40B-212ENST00000551111 A6NJY4 79 aa7.17□□□□□ -1.26
PRPF40B-212ENST00000551111 I3L3M4 83 aa7.17□□□□□ -1.26
PRPF40B-212ENST00000551111 GATCO43716 136 aaKnown RBP7.17□□□□□ -1.26
PRPF40B-212ENST00000551111 PMCHP20382 165 aa7.17□□□□□ -1.26
PRPF40B-212ENST00000551111 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
PRPF40B-212ENST00000551111 SLC51BQ86UW2 128 aa7.17□□□□□ -1.26
PRPF40B-212ENST00000551111 TRBV6-5A0A0K0K1A5 114 aa7.16□□□□□ -1.26
PRPF40B-212ENST00000551111 H7C423 109 aa7.16□□□□□ -1.26
PRPF40B-212ENST00000551111 SRSF9Q13242 221 aaKnown RBP eCLIP7.16□□□□□ -1.26
PRPF40B-212ENST00000551111 LPAP08519 4548 aa7.16□□□□□ -1.26
PRPF40B-212ENST00000551111 A0A0J9YXV3 536 aa7.15□□□□□ -1.26
PRPF40B-212ENST00000551111 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
PRPF40B-212ENST00000551111 POLR2KP53803 58 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms