RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 NDUFA11Q86Y39 141 aa6.71□□□□□ -1.33
UBE2N-205ENST00000550657 GTSF1LQ9H1H1 148 aa6.71□□□□□ -1.33
UBE2N-205ENST00000550657 TSSC4Q9Y5U2 329 aaPredicted RBP6.71□□□□□ -1.33
UBE2N-205ENST00000550657 A8MZ25 164 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 CFC1BP0CG36 223 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 CFC1P0CG37 223 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 UBE2D1P51668 147 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 ZNF415Q09FC8 603 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 IGHV3-53P01767 116 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 NPC2P61916 151 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 SLC25A29Q8N8R3 303 aa6.71□□□□□ -1.34
UBE2N-205ENST00000550657 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 CHD6Q8TD26 2715 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 NF1P21359 2839 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 AZU1P20160 251 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 DEFB114Q30KQ6 69 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 NFE4Q86UQ8 179 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 WFDC11Q8NEX6 87 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 C4orf3Q8WVX3 66 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 PTH2Q96A98 100 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 AMELXQ99217 191 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 A4D1N5 150 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 LEPROTO15243 131 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 PRSS2P07478 247 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 CFAP126Q5VTH2 177 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 RNF152Q8N8N0 203 aa6.7□□□□□ -1.34
UBE2N-205ENST00000550657 A8MWV9 139 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 Q1RN00 199 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 Q6ZSV7 163 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 TIMM21Q9BVV7 248 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 PRO0461Q9UI25 63 aa6.69□□□□□ -1.34
UBE2N-205ENST00000550657 TRGV1A0A0A0MS02 117 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 INSP01308 110 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 STHQ8IWL8 128 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 C10orf126Q8N4M7 172 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 LINC00467Q9BRT7 94 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 J3QR89 54 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 SMAGPQ0VAQ4 97 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 Q6ZUT4 128 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 UBR5O95071 2799 aaPredicted RBP6.68□□□□□ -1.34
UBE2N-205ENST00000550657 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
UBE2N-205ENST00000550657 TCL1BO95988 128 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 C2CD3Q4AC94 2353 aa6.68□□□□□ -1.34
UBE2N-205ENST00000550657 AKAP9Q99996 3911 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 APCP25054 2843 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 DNAJC9-AS1A6NH13 148 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
UBE2N-205ENST00000550657 FAM104AQ969W3 186 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 ODF3L2Q3SX64 289 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 DGAT2L7PQ6IED9 249 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 Q8N2B8 174 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
UBE2N-205ENST00000550657 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 GAGE12HA6NDE8 117 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
UBE2N-205ENST00000550657 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 CR1P17927 2039 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 CCL24O00175 119 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
UBE2N-205ENST00000550657 UBE2D3P61077 147 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 UBE2D2P62837 147 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 DAND5Q8N907 189 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 WFDC10AQ9H1F0 79 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 ESM1Q9NQ30 184 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
UBE2N-205ENST00000550657 ACANP16112 2415 aa6.65□□□□□ -1.34
UBE2N-205ENST00000550657 ITPR3Q14573 2671 aa6.65□□□□□ -1.34
UBE2N-205ENST00000550657 TMEM238C9JI98 176 aa6.65□□□□□ -1.34
UBE2N-205ENST00000550657 CITED2Q99967 270 aaPredicted RBP6.65□□□□□ -1.34
UBE2N-205ENST00000550657 ERG28Q9UKR5 140 aa6.65□□□□□ -1.34
UBE2N-205ENST00000550657 JMJD1CQ15652 2540 aa6.65□□□□□ -1.34
UBE2N-205ENST00000550657 NDUFA7O95182 113 aa6.65□□□□□ -1.35
UBE2N-205ENST00000550657 ZNF625Q96I27 306 aaPredicted RBP6.65□□□□□ -1.35
UBE2N-205ENST00000550657 SIGMAR1Q99720 223 aa6.65□□□□□ -1.35
UBE2N-205ENST00000550657 PYGO1Q9Y3Y4 419 aa6.65□□□□□ -1.35
UBE2N-205ENST00000550657 MTORP42345 2549 aa6.65□□□□□ -1.35
UBE2N-205ENST00000550657 MRPS36P82909 103 aaKnown RBP6.64□□□□□ -1.35
UBE2N-205ENST00000550657 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
UBE2N-205ENST00000550657 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
UBE2N-205ENST00000550657 Q6ZTI0 123 aa6.64□□□□□ -1.35
UBE2N-205ENST00000550657 C1orf158Q8N1D5 194 aa6.64□□□□□ -1.35
UBE2N-205ENST00000550657 FLNAP21333 2647 aaKnown RBP6.64□□□□□ -1.35
UBE2N-205ENST00000550657 RPL35AP18077 110 aaKnown RBP6.64□□□□□ -1.35
UBE2N-205ENST00000550657 C1QTNF4Q9BXJ3 329 aa6.64□□□□□ -1.35
UBE2N-205ENST00000550657 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 IGHV1-58A0A0C4DH39 117 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 GAGE12JA6NER3 117 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 A8MTW9 85 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 FOXI1Q12951 378 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 GAGE4Q13068 117 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 GAGE5Q13069 117 aa6.63□□□□□ -1.35
UBE2N-205ENST00000550657 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms