RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 SMAGPQ0VAQ4 97 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 GAGE1Q13065 139 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 GAGE4Q13068 117 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 GAGE5Q13069 117 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 GAGE13Q4V321 117 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 TMEM97Q5BJF2 176 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 Q6ZN92 141 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 ERASQ7Z444 233 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 TMEM141Q96I45 108 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 NBEAL2Q6ZNJ1 2754 aa8.74□□□□□ -1.01
RAB5B-204ENST00000548068 CRYBA4P53673 196 aa8.73□□□□□ -1.01
RAB5B-204ENST00000548068 LGALS9CQ6DKI2 356 aa8.73□□□□□ -1.01
RAB5B-204ENST00000548068 PHLDA1Q8WV24 401 aaPredicted RBP8.73□□□□□ -1.01
RAB5B-204ENST00000548068 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
RAB5B-204ENST00000548068 ZMAT4Q9H898 229 aa8.73□□□□□ -1.01
RAB5B-204ENST00000548068 MGAM2Q2M2H8 2515 aa8.73□□□□□ -1.01
RAB5B-204ENST00000548068 H0Y8G0 127 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 PAX4O43316 350 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 PRSS1P07477 247 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 NPSP0C0P6 89 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 PAPPA-AS1Q5QFB9 102 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 LINC01545Q5VT33 79 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 TEX43Q6ZNM6 134 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 GTSF1LQ9H1H1 148 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 Q9UF83 564 aa8.72□□□□□ -1.01
RAB5B-204ENST00000548068 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
RAB5B-204ENST00000548068 LINC00694P0DN24 101 aa8.71□□□□□ -1.02
RAB5B-204ENST00000548068 GYPEP15421 78 aa8.71□□□□□ -1.02
RAB5B-204ENST00000548068 Q8N976 141 aa8.71□□□□□ -1.02
RAB5B-204ENST00000548068 MRAPQ8TCY5 172 aa8.71□□□□□ -1.02
RAB5B-204ENST00000548068 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 A0A0J9YWU9 116 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 F5H768 121 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 RPL39P62891 51 aaKnown RBP8.7□□□□□ -1.02
RAB5B-204ENST00000548068 SH2D6Q7Z4S9 175 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 SPANXA1Q9NS26 97 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
RAB5B-204ENST00000548068 LOC100131303A0A0U1RQF7 123 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 HTN3P15516 51 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 C12orf74Q32Q52 190 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 DEFB104AQ8WTQ1 72 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
RAB5B-204ENST00000548068 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 A0A087WX48 190 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 H7C423 109 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 BAALCQ8WXS3 180 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
RAB5B-204ENST00000548068 H3BNG1 76 aa8.67□□□□□ -1.02
RAB5B-204ENST00000548068 UBE2L6O14933 153 aa8.67□□□□□ -1.02
RAB5B-204ENST00000548068 PLNP26678 52 aa8.67□□□□□ -1.02
RAB5B-204ENST00000548068 ODF1Q14990 250 aa8.67□□□□□ -1.02
RAB5B-204ENST00000548068 PMVKQ15126 192 aa8.67□□□□□ -1.02
RAB5B-204ENST00000548068 MRPL23Q16540 153 aaKnown RBP8.67□□□□□ -1.02
RAB5B-204ENST00000548068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-204ENST00000548068 TRAV9-2A0A087WT02 112 aa8.66□□□□□ -1.02
RAB5B-204ENST00000548068 TRBV6-8A0A0A6YYG3 113 aa8.66□□□□□ -1.02
RAB5B-204ENST00000548068 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-204ENST00000548068 DPM2O94777 84 aa8.66□□□□□ -1.02
RAB5B-204ENST00000548068 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
RAB5B-204ENST00000548068 A0A0J9YY99 117 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 F8VRH5 84 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 TSTD3H0UI37 97 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.02
RAB5B-204ENST00000548068 DGAT2L7PQ6IED9 249 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 NTM-AS1Q6ZSK4 140 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 Q6ZTC4 211 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
RAB5B-204ENST00000548068 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
RAB5B-204ENST00000548068 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
RAB5B-204ENST00000548068 IGLV4-3A0A075B6K6 122 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 IGKCP01834 107 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 ZNF25P17030 456 aaPredicted RBP8.64□□□□□ -1.03
RAB5B-204ENST00000548068 PKIAP61925 76 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 AMMECR1LQ6DCA0 310 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 TMEM101Q96IK0 257 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 VCX2Q9H322 139 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 PAM16Q9Y3D7 125 aa8.64□□□□□ -1.03
RAB5B-204ENST00000548068 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
RAB5B-204ENST00000548068 TRAV10A0A0B4J240 114 aa8.63□□□□□ -1.03
RAB5B-204ENST00000548068 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
RAB5B-204ENST00000548068 NHLRC4P0CG21 123 aaPredicted RBP8.63□□□□□ -1.03
RAB5B-204ENST00000548068 FGF6P10767 208 aa8.63□□□□□ -1.03
RAB5B-204ENST00000548068 NANOS2P60321 138 aaKnown RBP8.63□□□□□ -1.03
RAB5B-204ENST00000548068 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
RAB5B-204ENST00000548068 C2orf88Q9BSF0 95 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms