RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TMEM70Q9BUB7 260 aa8.31□□□□□ -1.08
HDAC7-226ENST00000547259 MAP1LC3AQ9H492 121 aa8.31□□□□□ -1.08
HDAC7-226ENST00000547259 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
HDAC7-226ENST00000547259 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
HDAC7-226ENST00000547259 TRGC2P03986 189 aa8.3□□□□□ -1.08
HDAC7-226ENST00000547259 ALKBH7Q9BT30 221 aaPredicted RBP8.3□□□□□ -1.08
HDAC7-226ENST00000547259 GTSF1LQ9H1H1 148 aa8.3□□□□□ -1.08
HDAC7-226ENST00000547259 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 I3L3M4 83 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 PMCHP20382 165 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 CCL18P55774 89 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 COTL1Q14019 142 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 SMIM2Q9BVW6 85 aa8.29□□□□□ -1.08
HDAC7-226ENST00000547259 TRBV27A0A0K0K1C4 114 aa8.28□□□□□ -1.08
HDAC7-226ENST00000547259 VCYO14598 125 aa8.28□□□□□ -1.08
HDAC7-226ENST00000547259 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
HDAC7-226ENST00000547259 RPL32P62910 135 aaKnown RBP8.28□□□□□ -1.08
HDAC7-226ENST00000547259 ESRGQ1W209 222 aa8.28□□□□□ -1.08
HDAC7-226ENST00000547259 TMEM97Q5BJF2 176 aa8.28□□□□□ -1.08
HDAC7-226ENST00000547259 C6orf223Q8N319 242 aa8.28□□□□□ -1.08
HDAC7-226ENST00000547259 NBDYA0A0U1RRE5 68 aa8.27□□□□□ -1.09
HDAC7-226ENST00000547259 FCER1GP30273 86 aa8.27□□□□□ -1.09
HDAC7-226ENST00000547259 TIRAPP58753 221 aa8.27□□□□□ -1.09
HDAC7-226ENST00000547259 KIR2DL4Q99706 377 aa8.27□□□□□ -1.09
HDAC7-226ENST00000547259 LINC00588Q9Y4M8 146 aa8.27□□□□□ -1.09
HDAC7-226ENST00000547259 TRBV6-8A0A0A6YYG3 113 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 IGHV1-24A0A0C4DH33 117 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 PRSS47A8MTI9 375 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 TSHBP01222 138 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 AMTP48728 403 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 IQCJQ1A5X6 159 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 LELP1Q5T871 98 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 C18orf32Q8TCD1 76 aa8.26□□□□□ -1.09
HDAC7-226ENST00000547259 NXT2Q9NPJ8 142 aaKnown RBP8.26□□□□□ -1.09
HDAC7-226ENST00000547259 MRPS16Q9Y3D3 137 aaKnown RBP8.26□□□□□ -1.09
HDAC7-226ENST00000547259 TRBV25-1A0A075B6N4 114 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 TRAV8-6A0A0B4J262 113 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 TCAPO15273 167 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 IFI27P40305 119 aaPredicted RBP8.25□□□□□ -1.09
HDAC7-226ENST00000547259 TTC32Q5I0X7 151 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 NTM-AS1Q6ZSK4 140 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 Q8N8P6 123 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
HDAC7-226ENST00000547259 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
HDAC7-226ENST00000547259 BTF3P20290 206 aaKnown RBP8.24□□□□□ -1.09
HDAC7-226ENST00000547259 TNP2Q05952 138 aa8.24□□□□□ -1.09
HDAC7-226ENST00000547259 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
HDAC7-226ENST00000547259 CHCHD5Q9BSY4 110 aa8.24□□□□□ -1.09
HDAC7-226ENST00000547259 TMEM243Q9BU79 118 aa8.24□□□□□ -1.09
HDAC7-226ENST00000547259 HSPG2P98160 4391 aa8.24□□□□□ -1.09
HDAC7-226ENST00000547259 C1orf196B1AJZ1 125 aa8.23□□□□□ -1.09
HDAC7-226ENST00000547259 UBE2L6O14933 153 aa8.23□□□□□ -1.09
HDAC7-226ENST00000547259 WFDC10BQ8IUB3 73 aa8.23□□□□□ -1.09
HDAC7-226ENST00000547259 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
HDAC7-226ENST00000547259 UPK3BQ9BT76 320 aa8.23□□□□□ -1.09
HDAC7-226ENST00000547259 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
HDAC7-226ENST00000547259 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
HDAC7-226ENST00000547259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.1
HDAC7-226ENST00000547259 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.1
HDAC7-226ENST00000547259 K7EMI3 77 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 SIVA1O15304 175 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 RAB5BP61020 215 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 PKIAP61925 76 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 GAGE6Q13070 117 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 LAGE3Q14657 143 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.1
HDAC7-226ENST00000547259 BAGE3Q86Y29 109 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 Q9H8V8 135 aa8.21□□□□□ -1.1
HDAC7-226ENST00000547259 TMEM262E9PQX1 116 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BKO60814 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BJP06899 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 ESDP10768 282 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BOP23527 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 Q0VG73 95 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
HDAC7-226ENST00000547259 NIT1Q86X76 327 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 Q8N1X5 172 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 TMEM18Q96B42 140 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
HDAC7-226ENST00000547259 A0A087WX48 190 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 IGHV3-30P01768 117 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 LINC00614P0C842 121 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 IGHV3-30-5P0DP03 117 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 AMMECR1LQ6DCA0 310 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 C20orf203Q8NBC4 194 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 URB1-AS1Q96HZ7 61 aa8.19□□□□□ -1.1
HDAC7-226ENST00000547259 LRP1BQ9NZR2 4599 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms