RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 J3QL48 77 aa6.09□□□□□ -1.43
YBX3-218ENST00000546298 AMTP48728 403 aa6.09□□□□□ -1.43
YBX3-218ENST00000546298 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
YBX3-218ENST00000546298 TEX261Q6UWH6 196 aa6.09□□□□□ -1.43
YBX3-218ENST00000546298 A8MWL6 223 aa6.08□□□□□ -1.44
YBX3-218ENST00000546298 GATCO43716 136 aaKnown RBP6.08□□□□□ -1.44
YBX3-218ENST00000546298 PRSS1P07477 247 aa6.08□□□□□ -1.44
YBX3-218ENST00000546298 ALKAL2Q6UX46 152 aa6.08□□□□□ -1.44
YBX3-218ENST00000546298 FAM231DQ6ZW35 169 aa6.08□□□□□ -1.44
YBX3-218ENST00000546298 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
YBX3-218ENST00000546298 CIRBP-AS1Q8TBR5 109 aa6.08□□□□□ -1.44
YBX3-218ENST00000546298 RNASE7Q9H1E1 156 aaKnown RBP6.08□□□□□ -1.44
YBX3-218ENST00000546298 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
YBX3-218ENST00000546298 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
YBX3-218ENST00000546298 K7EN84 100 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 NCR2O95944 276 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 KRTAP26-1Q6PEX3 210 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 BORCS7Q96B45 105 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 AP5S1Q9NUS5 200 aa6.07□□□□□ -1.44
YBX3-218ENST00000546298 IGLV4-60A0A075B6I1 120 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 IGLV10-54A0A075B6I4 117 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.06□□□□□ -1.44
YBX3-218ENST00000546298 H7C423 109 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 NDUFS6O75380 124 aaKnown RBP6.06□□□□□ -1.44
YBX3-218ENST00000546298 FOXA3P55318 350 aaPredicted RBP6.06□□□□□ -1.44
YBX3-218ENST00000546298 CT83Q5H943 113 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 AMMECR1LQ6DCA0 310 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 CFAP161Q6P656 301 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 LYPD6BQ8NI32 183 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 GTSF1Q8WW33 167 aa6.06□□□□□ -1.44
YBX3-218ENST00000546298 EIF5A2Q9GZV4 153 aaKnown RBP6.06□□□□□ -1.44
YBX3-218ENST00000546298 APOBP04114 4563 aaKnown RBP6.06□□□□□ -1.44
YBX3-218ENST00000546298 DMBT1Q9UGM3 2413 aaPredicted RBP6.06□□□□□ -1.44
YBX3-218ENST00000546298 hCG_2014768A0A024R1R8 64 aa6.05□□□□□ -1.44
YBX3-218ENST00000546298 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
YBX3-218ENST00000546298 hDV102S1A0JD36 115 aa6.05□□□□□ -1.44
YBX3-218ENST00000546298 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
YBX3-218ENST00000546298 CEBPGP53567 150 aa6.05□□□□□ -1.44
YBX3-218ENST00000546298 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
YBX3-218ENST00000546298 FAM210AQ96ND0 272 aa6.05□□□□□ -1.44
YBX3-218ENST00000546298 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
YBX3-218ENST00000546298 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
YBX3-218ENST00000546298 APCSP02743 223 aa6.04□□□□□ -1.44
YBX3-218ENST00000546298 RNASEKQ6P5S7 137 aaKnown RBP6.04□□□□□ -1.44
YBX3-218ENST00000546298 SDIM1Q6ZPB5 146 aa6.04□□□□□ -1.44
YBX3-218ENST00000546298 SMIM7Q9BQ49 75 aa6.04□□□□□ -1.44
YBX3-218ENST00000546298 GFRA4Q9GZZ7 299 aa6.04□□□□□ -1.44
YBX3-218ENST00000546298 IGHV3-64A0A075B6Q5 118 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 TRBV6-5A0A0K0K1A5 114 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 A0A1B0GUT8 65 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 FAM231BA6NCW3 169 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 GAGE12HA6NDE8 117 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 ZNF727A8MUV8 499 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 I3L3M4 83 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 PMCHP20382 165 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 TSKUQ8WUA8 353 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 RPL39LQ96EH5 51 aaKnown RBP6.03□□□□□ -1.44
YBX3-218ENST00000546298 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 BTF3L4Q96K17 158 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 OSTCQ9NRP0 149 aa6.03□□□□□ -1.44
YBX3-218ENST00000546298 IGKV3OR2-268A0A0C4DH90 116 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 FGF6P10767 208 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 ZNF25P17030 456 aaPredicted RBP6.02□□□□□ -1.45
YBX3-218ENST00000546298 SMCPP49901 116 aaPredicted RBP6.02□□□□□ -1.45
YBX3-218ENST00000546298 RPL37AP61513 92 aaKnown RBP6.02□□□□□ -1.45
YBX3-218ENST00000546298 LINC01551Q86U37 167 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 TMEM101Q96IK0 257 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 TMEM191AQ9H0A3 160 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 ST20Q9HBF5 79 aa6.02□□□□□ -1.45
YBX3-218ENST00000546298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.01□□□□□ -1.45
YBX3-218ENST00000546298 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
YBX3-218ENST00000546298 HIGD1CA8MV81 97 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 PPP1R17O96001 155 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 OXTP01178 125 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
YBX3-218ENST00000546298 RIGQ13278 110 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 FAM74A3Q4VXF1 159 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 CHCHD10Q8WYQ3 142 aaPredicted RBP6.01□□□□□ -1.45
YBX3-218ENST00000546298 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 RNF185Q96GF1 192 aa6.01□□□□□ -1.45
YBX3-218ENST00000546298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.01□□□□□ -1.45
YBX3-218ENST00000546298 RPS10P46783 165 aaKnown RBP6□□□□□ -1.45
YBX3-218ENST00000546298 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
YBX3-218ENST00000546298 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
YBX3-218ENST00000546298 TMEM241Q24JQ0 296 aa6□□□□□ -1.45
YBX3-218ENST00000546298 OR5A1Q8NGJ0 315 aa6□□□□□ -1.45
YBX3-218ENST00000546298 ESDP10768 282 aa5.99□□□□□ -1.45
YBX3-218ENST00000546298 RAB4AP20338 218 aa5.99□□□□□ -1.45
YBX3-218ENST00000546298 SMAGPQ0VAQ4 97 aa5.99□□□□□ -1.45
YBX3-218ENST00000546298 TMEM242Q9NWH2 141 aa5.99□□□□□ -1.45
YBX3-218ENST00000546298 PKIGQ9Y2B9 76 aa5.99□□□□□ -1.45
YBX3-218ENST00000546298 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
YBX3-218ENST00000546298 TRBV27A0A0K0K1C4 114 aa5.98□□□□□ -1.45
YBX3-218ENST00000546298 VCYO14598 125 aa5.98□□□□□ -1.45
YBX3-218ENST00000546298 TSHBP01222 138 aa5.98□□□□□ -1.45
YBX3-218ENST00000546298 SLPIP03973 132 aa5.98□□□□□ -1.45
YBX3-218ENST00000546298 FCER1GP30273 86 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms