RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 HIVEP2P31629 2446 aa8.49□□□□□ -1.05
DDB1-224ENST00000545894 Q6ZUT4 128 aa8.49□□□□□ -1.05
DDB1-224ENST00000545894 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
DDB1-224ENST00000545894 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
DDB1-224ENST00000545894 A4D1N5 150 aa8.48□□□□□ -1.05
DDB1-224ENST00000545894 MT-ATP8P03928 68 aa8.48□□□□□ -1.05
DDB1-224ENST00000545894 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
DDB1-224ENST00000545894 ESM1Q9NQ30 184 aa8.48□□□□□ -1.05
DDB1-224ENST00000545894 XGP55808 180 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 DUX5Q96PT3 197 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 SONP18583 2426 aaKnown RBP8.47□□□□□ -1.05
DDB1-224ENST00000545894 FN1P02751 2386 aaKnown RBP8.47□□□□□ -1.05
DDB1-224ENST00000545894 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 P0DMU3 169 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 FAM231AP0DMU4 169 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 FAM231CP0DMU5 169 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 CFHR3Q02985 330 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 Q8N1Y9 231 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 RAX2Q96IS3 184 aa8.47□□□□□ -1.05
DDB1-224ENST00000545894 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.05
DDB1-224ENST00000545894 A0A0B4J2C4 111 aa8.46□□□□□ -1.05
DDB1-224ENST00000545894 RHODO00212 210 aa8.46□□□□□ -1.05
DDB1-224ENST00000545894 IGHV3-33P01772 117 aa8.46□□□□□ -1.05
DDB1-224ENST00000545894 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.05
DDB1-224ENST00000545894 TMEM263Q8WUH6 116 aaKnown RBP8.46□□□□□ -1.05
DDB1-224ENST00000545894 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.05
DDB1-224ENST00000545894 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
DDB1-224ENST00000545894 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 A0A0J9YX75 114 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 I3L3M4 83 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 M0QXV9 152 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 IGKV3-20P01619 116 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
DDB1-224ENST00000545894 SLC25A20O43772 301 aa8.45□□□□□ -1.06
DDB1-224ENST00000545894 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
DDB1-224ENST00000545894 HILS1P60008 231 aa8.45□□□□□ -1.06
DDB1-224ENST00000545894 SNRPD3P62318 126 aaKnown RBP8.45□□□□□ -1.06
DDB1-224ENST00000545894 MUSTN1Q8IVN3 82 aa8.45□□□□□ -1.06
DDB1-224ENST00000545894 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
DDB1-224ENST00000545894 TMEM86BQ8N661 226 aa8.45□□□□□ -1.06
DDB1-224ENST00000545894 VPREB3Q9UKI3 123 aa8.45□□□□□ -1.06
DDB1-224ENST00000545894 IGLV4-3A0A075B6K6 122 aa8.44□□□□□ -1.06
DDB1-224ENST00000545894 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
DDB1-224ENST00000545894 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
DDB1-224ENST00000545894 C9JAW5 83 aa8.44□□□□□ -1.06
DDB1-224ENST00000545894 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
DDB1-224ENST00000545894 M0R2P5 195 aa8.43□□□□□ -1.06
DDB1-224ENST00000545894 SPINK13Q1W4C9 94 aa8.43□□□□□ -1.06
DDB1-224ENST00000545894 H7C2G1 150 aa8.43□□□□□ -1.06
DDB1-224ENST00000545894 K7EQG2 157 aa8.43□□□□□ -1.06
DDB1-224ENST00000545894 ZNF580Q9UK33 172 aa8.43□□□□□ -1.06
DDB1-224ENST00000545894 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
DDB1-224ENST00000545894 PSMB8P28062 276 aa8.42□□□□□ -1.06
DDB1-224ENST00000545894 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
DDB1-224ENST00000545894 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
DDB1-224ENST00000545894 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
DDB1-224ENST00000545894 RNASE1P07998 156 aaKnown RBP8.42□□□□□ -1.06
DDB1-224ENST00000545894 Q1RN00 199 aa8.42□□□□□ -1.06
DDB1-224ENST00000545894 MTORP42345 2549 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 TRGV11A0A075B6L2 103 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 ATXN8Q156A1 80 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 CD28P10747 220 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
DDB1-224ENST00000545894 PRIMA1Q86XR5 153 aa8.4□□□□□ -1.06
DDB1-224ENST00000545894 SPXQ9BT56 116 aa8.4□□□□□ -1.06
DDB1-224ENST00000545894 NIPBLQ6KC79 2804 aaeCLIP8.4□□□□□ -1.06
DDB1-224ENST00000545894 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.07
DDB1-224ENST00000545894 LINC01620Q4KN68 170 aa8.4□□□□□ -1.07
DDB1-224ENST00000545894 RNF152Q8N8N0 203 aa8.4□□□□□ -1.07
DDB1-224ENST00000545894 CLUHP3Q96NS8 147 aa8.4□□□□□ -1.07
DDB1-224ENST00000545894 EDA2RQ9HAV5 297 aa8.4□□□□□ -1.07
DDB1-224ENST00000545894 TRBV30A0A0K0K1B3 111 aa8.39□□□□□ -1.07
DDB1-224ENST00000545894 LITAFQ99732 161 aa8.39□□□□□ -1.07
DDB1-224ENST00000545894 ADARB2-AS1A8MUL3 147 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 ELANEP08246 267 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 ZFAND6Q6FIF0 208 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
DDB1-224ENST00000545894 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 IGHV1-58A0A0C4DH39 117 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 TMEM89A2RUT3 159 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 ZNF702PQ9H963 129 aa8.38□□□□□ -1.07
DDB1-224ENST00000545894 TRIAP1O43715 76 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 SYNJ2BPP57105 145 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 CITED1Q99966 193 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 NF1P21359 2839 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 TRAV8-3A0A0A6YYJ7 113 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 PRSS2P07478 247 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 Q6ZSV7 163 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 RNF183Q96D59 192 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms