RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 CDPF1Q6NVV7 123 aa5.7□□□□□ -1.5
LRP6-206ENST00000543091 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
LRP6-206ENST00000543091 RS1O15537 224 aa5.7□□□□□ -1.5
LRP6-206ENST00000543091 RPL39LQ96EH5 51 aaKnown RBP5.7□□□□□ -1.5
LRP6-206ENST00000543091 ZNF479Q96JC4 524 aa5.7□□□□□ -1.5
LRP6-206ENST00000543091 LINC00322Q6ZN03 302 aaPredicted RBP5.69□□□□□ -1.5
LRP6-206ENST00000543091 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 MGAM2Q2M2H8 2515 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 SIVA1O15304 175 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 IGHV3-30P01768 117 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 IGHV3-33P01772 117 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 IGHV3-30-3P0DP02 117 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 IGHV3-30-5P0DP03 117 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 JPT2Q9H910 190 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 A0A1B0GXF2 115 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 PRIMA1Q86XR5 153 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 CST9LQ9H4G1 147 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 DMXL2Q8TDJ6 3036 aa5.69□□□□□ -1.5
LRP6-206ENST00000543091 PRR9Q5T870 116 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 GTSF1LQ9H1H1 148 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 RETNQ9HD89 108 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 PSMB2P49721 201 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 CFAP126Q5VTH2 177 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
LRP6-206ENST00000543091 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
LRP6-206ENST00000543091 COX8AP10176 69 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 GATA1P15976 413 aaPredicted RBP5.68□□□□□ -1.5
LRP6-206ENST00000543091 CRIP1P50238 77 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 HERVK_113P63121 156 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 OR13C6PQ8NH95 151 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 EYSQ5T1H1 3165 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 COX6CP09669 75 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 C1orf158Q8N1D5 194 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 CHAC1Q9BUX1 264 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
LRP6-206ENST00000543091 NUPR1O60356 82 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 LINC00158P58513 81 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
LRP6-206ENST00000543091 C9orf85Q96MD7 179 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 hDV102S1A0JD36 115 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 KPRPQ5T749 579 aaPredicted RBP5.67□□□□□ -1.5
LRP6-206ENST00000543091 ZFAND6Q6FIF0 208 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 CLPSL2Q6UWE3 100 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 DMXL1Q9Y485 3027 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.67□□□□□ -1.5
LRP6-206ENST00000543091 FGF6P10767 208 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 C11orf68Q9H3H3 251 aaKnown RBP5.67□□□□□ -1.5
LRP6-206ENST00000543091 FRYQ5TBA9 3013 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 MYMXA0A1B0GTQ4 84 aa5.67□□□□□ -1.5
LRP6-206ENST00000543091 P0DMU3 169 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 FAM231AP0DMU4 169 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 FAM231CP0DMU5 169 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 RNASE3P12724 160 aaKnown RBP5.66□□□□□ -1.5
LRP6-206ENST00000543091 MPV17L2Q567V2 206 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 DKK2Q9UBU2 259 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 IGHV3-64A0A075B6Q5 118 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 SLC25A29Q8N8R3 303 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 GATD1Q8NB37 220 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 TMEM238C9JI98 176 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 LINC01545Q5VT33 79 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 LINC00467Q9BRT7 94 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 KLK12Q9UKR0 248 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 XCL1P47992 114 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
LRP6-206ENST00000543091 ZNF815PA8K554 130 aa5.65□□□□□ -1.5
LRP6-206ENST00000543091 RBMY1BA6NDE4 496 aaKnown RBP5.65□□□□□ -1.51
LRP6-206ENST00000543091 RBMY1EA6NEQ0 496 aaKnown RBP5.65□□□□□ -1.51
LRP6-206ENST00000543091 RBMY1DP0C7P1 496 aaKnown RBP5.65□□□□□ -1.51
LRP6-206ENST00000543091 TAL2Q16559 108 aa5.65□□□□□ -1.51
LRP6-206ENST00000543091 SPATA12Q7Z6I5 190 aa5.65□□□□□ -1.51
LRP6-206ENST00000543091 TRAV8-3A0A0A6YYJ7 113 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 KRTAP10-3P60369 221 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 C14orf177Q52M58 125 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 ZC2HC1BQ5TFG8 222 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 COX8CQ7Z4L0 72 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 SETXQ7Z333 2677 aaKnown RBP5.64□□□□□ -1.51
LRP6-206ENST00000543091 H3BUT2 72 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 RNASE8Q8TDE3 154 aaKnown RBP5.64□□□□□ -1.51
LRP6-206ENST00000543091 MDFIQ99750 246 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 F8W1H4 67 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 H7C423 109 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 RBMY1A1P0DJD3 496 aaKnown RBP5.64□□□□□ -1.51
LRP6-206ENST00000543091 RBMY1CP0DJD4 496 aa5.64□□□□□ -1.51
LRP6-206ENST00000543091 F8VRH5 84 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 COX7A2LO14548 114 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 NPSP0C0P6 89 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 IGHV4-4A0A075B6R2 117 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 CRYGDP07320 174 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 C20orf203Q8NBC4 194 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 B9D2Q9BPU9 175 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 STAB1Q9NY15 2570 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 COL6A5A8TX70 2615 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 A0A0U1RRA0 63 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 SAMD5Q5TGI4 173 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 SFTA2Q6UW10 78 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 NFE4Q86UQ8 179 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 SCRT2Q9NQ03 307 aa5.63□□□□□ -1.51
LRP6-206ENST00000543091 AGRNO00468 2067 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms