RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 TSHBP01222 138 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 Q0VG73 95 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 SMIM2Q9BVW6 85 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 Q9H8V8 135 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 IGHV1-24A0A0C4DH33 117 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 A0A1B0GUV1 79 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 LINC00614P0C842 121 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 DNAH10OSP0CZ25 163 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 IFI27P40305 119 aaPredicted RBP4□□□□□ -1.77
ABCF1-207ENST00000542772 COTL1Q14019 142 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 NIT1Q86X76 327 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 URB1-AS1Q96HZ7 61 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 KIR2DL4Q99706 377 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 CHCHD7Q9BUK0 85 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
ABCF1-207ENST00000542772 NXT2Q9NPJ8 142 aaKnown RBP4□□□□□ -1.77
ABCF1-207ENST00000542772 CSDC2Q9Y534 153 aaKnown RBP4□□□□□ -1.77
ABCF1-207ENST00000542772 SACSQ9NZJ4 4579 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 TRBV25-1A0A075B6N4 114 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 TRAV8-6A0A0B4J262 113 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 LOC389332A0A1B0GUA5 103 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 SIVA1O15304 175 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 AKR1D1P51857 326 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 LINC01556Q5JQF7 62 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 C20orf203Q8NBC4 194 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 PRSS3P2Q8NHM4 247 aa3.99□□□□□ -1.77
ABCF1-207ENST00000542772 KMT2AQ03164 3969 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 LCE6AA0A183 80 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BKO60814 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BJP06899 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 SMIM6P0DI80 62 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 BTF3P20290 206 aaKnown RBP3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 G0S2P27469 103 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 AMTP48728 403 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 PKIAP61925 76 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 LAGE3Q14657 143 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
ABCF1-207ENST00000542772 MRPL52Q86TS9 123 aaKnown RBP3.98□□□□□ -1.77
ABCF1-207ENST00000542772 WFDC10BQ8IUB3 73 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 LINC00518Q8N0U6 118 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 CHCHD1Q96BP2 118 aaKnown RBP3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 TMEM243Q9BU79 118 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 TIMM21Q9BVV7 248 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 PYGO1Q9Y3Y4 419 aa3.98□□□□□ -1.77
ABCF1-207ENST00000542772 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
ABCF1-207ENST00000542772 TRAV9-2A0A087WT02 112 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 A0A096LNJ9 63 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 IGIPA6NJ69 53 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 IBA57-AS1B1ANH7 110 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 LY6G6CO95867 125 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 NPSP0C0P6 89 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 ZNF25P17030 456 aaPredicted RBP3.97□□□□□ -1.77
ABCF1-207ENST00000542772 FCER1GP30273 86 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 S100A12P80511 92 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 COA6Q5JTJ3 125 aaKnown RBP3.97□□□□□ -1.77
ABCF1-207ENST00000542772 Q6ZR54 194 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 UBE2DNLQ8IWF7 75 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 DEFB104AQ8WTQ1 72 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 TMEM18Q96B42 140 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 CDC42SE2Q9NRR3 84 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 PRR34Q9NV39 138 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 UBE2D4Q9Y2X8 147 aa3.97□□□□□ -1.77
ABCF1-207ENST00000542772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
ABCF1-207ENST00000542772 NBDYA0A0U1RRE5 68 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
ABCF1-207ENST00000542772 TMEM262E9PQX1 116 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 NUPR1O60356 82 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 FGF6P10767 208 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 LINC00310P59036 64 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 SNRPEP62304 92 aaKnown RBP3.96□□□□□ -1.78
ABCF1-207ENST00000542772 RBX1P62877 108 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 MRPS36P82909 103 aaKnown RBP3.96□□□□□ -1.78
ABCF1-207ENST00000542772 SMAGPQ0VAQ4 97 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 MPV17L2Q567V2 206 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 FA2HQ7L5A8 372 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 TOMM6Q96B49 74 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 C12orf57Q99622 126 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 CHCHD5Q9BSY4 110 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 AP5S1Q9NUS5 200 aa3.96□□□□□ -1.78
ABCF1-207ENST00000542772 HYDINQ4G0P3 5121 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 DNAH2Q9P225 4427 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 IGLV4-60A0A075B6I1 120 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 A0A087WX48 190 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 C5orf52A6NGY3 159 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 UBE2L6O14933 153 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 S100A2P29034 98 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 RPL39P62891 51 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms