RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 CEBPGP53567 150 aa13.16□□□□□ -0.3
DDB1-220ENST00000542337 CLRN3Q8NCR9 226 aa13.16□□□□□ -0.3
DDB1-220ENST00000542337 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
DDB1-220ENST00000542337 A8MWL6 223 aa13.15□□□□□ -0.3
DDB1-220ENST00000542337 PRSS1P07477 247 aa13.15□□□□□ -0.3
DDB1-220ENST00000542337 TEX261Q6UWH6 196 aa13.15□□□□□ -0.3
DDB1-220ENST00000542337 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
DDB1-220ENST00000542337 DEFB104AQ8WTQ1 72 aa13.15□□□□□ -0.3
DDB1-220ENST00000542337 J3QL48 77 aa13.14□□□□□ -0.31
DDB1-220ENST00000542337 GATD1Q8NB37 220 aa13.14□□□□□ -0.31
DDB1-220ENST00000542337 CIRBP-AS1Q8TBR5 109 aa13.14□□□□□ -0.31
DDB1-220ENST00000542337 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
DDB1-220ENST00000542337 EIF5A2Q9GZV4 153 aaKnown RBP13.14□□□□□ -0.31
DDB1-220ENST00000542337 FAM231DQ6ZW35 169 aa13.13□□□□□ -0.31
DDB1-220ENST00000542337 LYPD6BQ8NI32 183 aa13.13□□□□□ -0.31
DDB1-220ENST00000542337 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
DDB1-220ENST00000542337 FLG2Q5D862 2391 aaPredicted RBP13.13□□□□□ -0.31
DDB1-220ENST00000542337 IGLV4-60A0A075B6I1 120 aa13.12□□□□□ -0.31
DDB1-220ENST00000542337 TRAV26-2A0A0B4J265 109 aa13.12□□□□□ -0.31
DDB1-220ENST00000542337 KRTAP26-1Q6PEX3 210 aa13.12□□□□□ -0.31
DDB1-220ENST00000542337 HERC1Q15751 4861 aa13.12□□□□□ -0.31
DDB1-220ENST00000542337 C9orf163Q8N9P6 203 aa13.11□□□□□ -0.31
DDB1-220ENST00000542337 AP5S1Q9NUS5 200 aa13.11□□□□□ -0.31
DDB1-220ENST00000542337 MYCBP2O75592 4640 aa13.11□□□□□ -0.31
DDB1-220ENST00000542337 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
DDB1-220ENST00000542337 NCR2O95944 276 aa13.1□□□□□ -0.31
DDB1-220ENST00000542337 CT83Q5H943 113 aa13.1□□□□□ -0.31
DDB1-220ENST00000542337 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
DDB1-220ENST00000542337 SMIM7Q9BQ49 75 aa13.09□□□□□ -0.31
DDB1-220ENST00000542337 NDUFS6O75380 124 aaKnown RBP13.08□□□□□ -0.32
DDB1-220ENST00000542337 FOXA3P55318 350 aaPredicted RBP13.08□□□□□ -0.32
DDB1-220ENST00000542337 CFAP161Q6P656 301 aa13.08□□□□□ -0.32
DDB1-220ENST00000542337 RPL39LQ96EH5 51 aaKnown RBP13.08□□□□□ -0.32
DDB1-220ENST00000542337 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.32
DDB1-220ENST00000542337 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.07□□□□□ -0.32
DDB1-220ENST00000542337 H7C423 109 aa13.07□□□□□ -0.32
DDB1-220ENST00000542337 APCSP02743 223 aa13.07□□□□□ -0.32
DDB1-220ENST00000542337 RNASEKQ6P5S7 137 aaKnown RBP13.07□□□□□ -0.32
DDB1-220ENST00000542337 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
DDB1-220ENST00000542337 ZNF727A8MUV8 499 aa13.06□□□□□ -0.32
DDB1-220ENST00000542337 PMCHP20382 165 aa13.06□□□□□ -0.32
DDB1-220ENST00000542337 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
DDB1-220ENST00000542337 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
DDB1-220ENST00000542337 A0A1B0GUT8 65 aa13.05□□□□□ -0.32
DDB1-220ENST00000542337 I3L3M4 83 aa13.05□□□□□ -0.32
DDB1-220ENST00000542337 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
DDB1-220ENST00000542337 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
DDB1-220ENST00000542337 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
DDB1-220ENST00000542337 HIGD1CA8MV81 97 aa13.04□□□□□ -0.32
DDB1-220ENST00000542337 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
DDB1-220ENST00000542337 ST20Q9HBF5 79 aa13.04□□□□□ -0.32
DDB1-220ENST00000542337 OSTCQ9NRP0 149 aa13.04□□□□□ -0.32
DDB1-220ENST00000542337 IGHV3-64A0A075B6Q5 118 aa13.03□□□□□ -0.32
DDB1-220ENST00000542337 FAM231BA6NCW3 169 aa13.03□□□□□ -0.32
DDB1-220ENST00000542337 GAGE12HA6NDE8 117 aa13.03□□□□□ -0.32
DDB1-220ENST00000542337 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
DDB1-220ENST00000542337 TMEM101Q96IK0 257 aa13.03□□□□□ -0.32
DDB1-220ENST00000542337 BTF3L4Q96K17 158 aa13.03□□□□□ -0.32
DDB1-220ENST00000542337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.02□□□□□ -0.33
DDB1-220ENST00000542337 TRBV6-5A0A0K0K1A5 114 aa13.02□□□□□ -0.33
DDB1-220ENST00000542337 IGKV2-29A2NJV5 120 aaPredicted RBP13.02□□□□□ -0.33
DDB1-220ENST00000542337 KRTAP29-1A8MX34 341 aaPredicted RBP13.02□□□□□ -0.33
DDB1-220ENST00000542337 FGF6P10767 208 aa13.02□□□□□ -0.33
DDB1-220ENST00000542337 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
DDB1-220ENST00000542337 TMEM191AQ9H0A3 160 aa13.02□□□□□ -0.33
DDB1-220ENST00000542337 SRP19P09132 144 aaKnown RBP13.01□□□□□ -0.33
DDB1-220ENST00000542337 ZNF25P17030 456 aaPredicted RBP13.01□□□□□ -0.33
DDB1-220ENST00000542337 RIGQ13278 110 aa13□□□□□ -0.33
DDB1-220ENST00000542337 FAM74A3Q4VXF1 159 aa13□□□□□ -0.33
DDB1-220ENST00000542337 MRAP2Q96G30 205 aa13□□□□□ -0.33
DDB1-220ENST00000542337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
DDB1-220ENST00000542337 TMEM241Q24JQ0 296 aa12.99□□□□□ -0.33
DDB1-220ENST00000542337 CHCHD10Q8WYQ3 142 aaPredicted RBP12.99□□□□□ -0.33
DDB1-220ENST00000542337 PPP1R17O96001 155 aa12.97□□□□□ -0.33
DDB1-220ENST00000542337 RAB4AP20338 218 aa12.97□□□□□ -0.33
DDB1-220ENST00000542337 KRTAP10-4P60372 401 aaPredicted RBP12.97□□□□□ -0.33
DDB1-220ENST00000542337 OR5A1Q8NGJ0 315 aa12.97□□□□□ -0.33
DDB1-220ENST00000542337 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
DDB1-220ENST00000542337 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
DDB1-220ENST00000542337 TMEM242Q9NWH2 141 aa12.96□□□□□ -0.33
DDB1-220ENST00000542337 OXTP01178 125 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 TSHBP01222 138 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 SLPIP03973 132 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 NUP35Q8NFH5 326 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 NAT8BQ9UHF3 227 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 V9GYV3 84 aa12.95□□□□□ -0.34
DDB1-220ENST00000542337 TRBV27A0A0K0K1C4 114 aa12.94□□□□□ -0.34
DDB1-220ENST00000542337 VCYO14598 125 aa12.94□□□□□ -0.34
DDB1-220ENST00000542337 ESDP10768 282 aa12.94□□□□□ -0.34
DDB1-220ENST00000542337 PEA15Q15121 130 aa12.94□□□□□ -0.34
DDB1-220ENST00000542337 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
DDB1-220ENST00000542337 PANO1I0J062 215 aa12.93□□□□□ -0.34
DDB1-220ENST00000542337 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
DDB1-220ENST00000542337 FCER1GP30273 86 aa12.93□□□□□ -0.34
DDB1-220ENST00000542337 POLR2KP53803 58 aaKnown RBP12.93□□□□□ -0.34
DDB1-220ENST00000542337 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
DDB1-220ENST00000542337 CIRBPQ14011 172 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms