RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TRAV8-4A0A0B4J246 113 aa12.05□□□□□ -0.48
VARS2-212ENST00000542001 CITED2Q99967 270 aaPredicted RBP12.05□□□□□ -0.48
VARS2-212ENST00000542001 J3QLI3 93 aa12.05□□□□□ -0.48
VARS2-212ENST00000542001 CFAP161Q6P656 301 aa12.05□□□□□ -0.48
VARS2-212ENST00000542001 F8W1H4 67 aa12.04□□□□□ -0.48
VARS2-212ENST00000542001 E9PLD3 99 aa12.04□□□□□ -0.48
VARS2-212ENST00000542001 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
VARS2-212ENST00000542001 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
VARS2-212ENST00000542001 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
VARS2-212ENST00000542001 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
VARS2-212ENST00000542001 SLC25A20O43772 301 aa12.03□□□□□ -0.48
VARS2-212ENST00000542001 SPAG8Q99932 426 aaPredicted RBP12.03□□□□□ -0.48
VARS2-212ENST00000542001 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
VARS2-212ENST00000542001 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
VARS2-212ENST00000542001 U3KQK5 164 aa12.03□□□□□ -0.48
VARS2-212ENST00000542001 ATXN8Q156A1 80 aa12.03□□□□□ -0.48
VARS2-212ENST00000542001 K7EMT4 169 aa12.02□□□□□ -0.48
VARS2-212ENST00000542001 ZFAND6Q6FIF0 208 aa12.02□□□□□ -0.48
VARS2-212ENST00000542001 CFC1BP0CG36 223 aa12.02□□□□□ -0.49
VARS2-212ENST00000542001 CFC1P0CG37 223 aa12.02□□□□□ -0.49
VARS2-212ENST00000542001 IGLV10-54A0A075B6I4 117 aa12.02□□□□□ -0.49
VARS2-212ENST00000542001 K7EQG2 157 aa12.02□□□□□ -0.49
VARS2-212ENST00000542001 ZFHX4Q86UP3 3567 aa12.02□□□□□ -0.49
VARS2-212ENST00000542001 G3V4G9 280 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 CRPP02741 224 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 XCL1P47992 114 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 WFDC10AQ9H1F0 79 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 TAL2Q16559 108 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 C20orf203Q8NBC4 194 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 TMEM243Q9BU79 118 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 F5H768 121 aa12.01□□□□□ -0.49
VARS2-212ENST00000542001 PIFOQ8TCI5 191 aa12□□□□□ -0.49
VARS2-212ENST00000542001 B5MCH6 92 aa12□□□□□ -0.49
VARS2-212ENST00000542001 Q6ZUT4 128 aa12□□□□□ -0.49
VARS2-212ENST00000542001 Q6ZTI0 123 aa12□□□□□ -0.49
VARS2-212ENST00000542001 NEXN-AS1Q8NBZ9 246 aa12□□□□□ -0.49
VARS2-212ENST00000542001 COPS9Q8WXC6 57 aa12□□□□□ -0.49
VARS2-212ENST00000542001 ITPR1Q14643 2758 aa12□□□□□ -0.49
VARS2-212ENST00000542001 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
VARS2-212ENST00000542001 RHOHQ15669 191 aa11.99□□□□□ -0.49
VARS2-212ENST00000542001 CLUHP3Q96NS8 147 aa11.99□□□□□ -0.49
VARS2-212ENST00000542001 HIGD1BQ9P298 99 aa11.99□□□□□ -0.49
VARS2-212ENST00000542001 MGAM2Q2M2H8 2515 aa11.99□□□□□ -0.49
VARS2-212ENST00000542001 TRAV12-1A0A0B4J245 112 aa11.98□□□□□ -0.49
VARS2-212ENST00000542001 HHLA3Q9XRX5 114 aa11.98□□□□□ -0.49
VARS2-212ENST00000542001 ASH1LQ9NR48 2969 aaKnown RBP11.98□□□□□ -0.49
VARS2-212ENST00000542001 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
VARS2-212ENST00000542001 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
VARS2-212ENST00000542001 C1QTNF4Q9BXJ3 329 aa11.97□□□□□ -0.49
VARS2-212ENST00000542001 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
VARS2-212ENST00000542001 H3BMM0 161 aa11.97□□□□□ -0.49
VARS2-212ENST00000542001 LEPROTO15243 131 aa11.96□□□□□ -0.49
VARS2-212ENST00000542001 CLEC2BQ92478 149 aa11.96□□□□□ -0.49
VARS2-212ENST00000542001 IGHV4-31P0DP07 118 aa11.96□□□□□ -0.49
VARS2-212ENST00000542001 PSMB8P28062 276 aa11.96□□□□□ -0.49
VARS2-212ENST00000542001 CARD19Q96LW7 228 aa11.96□□□□□ -0.49
VARS2-212ENST00000542001 PRSS47A8MTI9 375 aa11.96□□□□□ -0.5
VARS2-212ENST00000542001 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.5
VARS2-212ENST00000542001 F8P00451 2351 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 M0QY20 66 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 CRYBA4P53673 196 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 RELNP78509 3460 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 C3orf56Q8N813 242 aa11.95□□□□□ -0.5
VARS2-212ENST00000542001 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 TMEM86BQ8N661 226 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 CDKN2A-AS1Q9UH64 79 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 INSL3P51460 131 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 RBMY1BA6NDE4 496 aaKnown RBP11.94□□□□□ -0.5
VARS2-212ENST00000542001 RBMY1EA6NEQ0 496 aaKnown RBP11.94□□□□□ -0.5
VARS2-212ENST00000542001 DNAJC9-AS1A6NH13 148 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 RBMY1DP0C7P1 496 aaKnown RBP11.94□□□□□ -0.5
VARS2-212ENST00000542001 RBMY1A1P0DJD3 496 aaKnown RBP11.94□□□□□ -0.5
VARS2-212ENST00000542001 RBMY1CP0DJD4 496 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 MAST4O15021 2626 aa11.94□□□□□ -0.5
VARS2-212ENST00000542001 CRLF1O75462 422 aa11.93□□□□□ -0.5
VARS2-212ENST00000542001 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
VARS2-212ENST00000542001 ZNF580Q9UK33 172 aa11.93□□□□□ -0.5
VARS2-212ENST00000542001 TEP1Q99973 2627 aaKnown RBP11.93□□□□□ -0.5
VARS2-212ENST00000542001 UBE2WQ96B02 151 aa11.93□□□□□ -0.5
VARS2-212ENST00000542001 NDUFA11Q86Y39 141 aa11.92□□□□□ -0.5
VARS2-212ENST00000542001 TCL1BO95988 128 aa11.92□□□□□ -0.5
VARS2-212ENST00000542001 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 ANKRD29Q8N6D5 301 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
VARS2-212ENST00000542001 CRYGDP07320 174 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 DAD1P61803 113 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 J3QKU1 62 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 ZNF22P17026 224 aaPredicted RBP11.91□□□□□ -0.5
VARS2-212ENST00000542001 Q6YL49 198 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
VARS2-212ENST00000542001 NDUFA7O95182 113 aa11.9□□□□□ -0.5
VARS2-212ENST00000542001 Q6ZSV7 163 aa11.9□□□□□ -0.5
VARS2-212ENST00000542001 IGLV1-40P01703 118 aa11.9□□□□□ -0.5
VARS2-212ENST00000542001 GYPEP15421 78 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms