RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 C20orf203Q8NBC4 194 aa13.04□□□□□ -0.32
ATN1-204ENST00000541029 IGLV4-60A0A075B6I1 120 aa13.03□□□□□ -0.32
ATN1-204ENST00000541029 FAM231DQ6ZW35 169 aa13.03□□□□□ -0.32
ATN1-204ENST00000541029 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
ATN1-204ENST00000541029 GFRA4Q9GZZ7 299 aa13.03□□□□□ -0.32
ATN1-204ENST00000541029 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
ATN1-204ENST00000541029 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.33
ATN1-204ENST00000541029 COTL1Q14019 142 aa13.02□□□□□ -0.33
ATN1-204ENST00000541029 PKHD1L1Q86WI1 4243 aa13.01□□□□□ -0.33
ATN1-204ENST00000541029 A0A1B0GVG6 124 aa13.01□□□□□ -0.33
ATN1-204ENST00000541029 PRSS1P07477 247 aa13.01□□□□□ -0.33
ATN1-204ENST00000541029 AMTP48728 403 aa13.01□□□□□ -0.33
ATN1-204ENST00000541029 RPL39LQ96EH5 51 aaKnown RBP13.01□□□□□ -0.33
ATN1-204ENST00000541029 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
ATN1-204ENST00000541029 UBE2L6O14933 153 aa13□□□□□ -0.33
ATN1-204ENST00000541029 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
ATN1-204ENST00000541029 SMIM7Q9BQ49 75 aa13□□□□□ -0.33
ATN1-204ENST00000541029 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
ATN1-204ENST00000541029 A0A1B0GUV1 79 aa12.99□□□□□ -0.33
ATN1-204ENST00000541029 A8MWL6 223 aa12.99□□□□□ -0.33
ATN1-204ENST00000541029 PLA2G1BP04054 148 aaKnown RBP12.99□□□□□ -0.33
ATN1-204ENST00000541029 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
ATN1-204ENST00000541029 CT83Q5H943 113 aa12.98□□□□□ -0.33
ATN1-204ENST00000541029 LINC01551Q86U37 167 aa12.98□□□□□ -0.33
ATN1-204ENST00000541029 CIRBP-AS1Q8TBR5 109 aa12.98□□□□□ -0.33
ATN1-204ENST00000541029 TRAV8-4A0A0B4J246 113 aa12.96□□□□□ -0.33
ATN1-204ENST00000541029 SRP19P09132 144 aaKnown RBP12.96□□□□□ -0.33
ATN1-204ENST00000541029 ZNF727A8MUV8 499 aa12.95□□□□□ -0.34
ATN1-204ENST00000541029 NDUFS6O75380 124 aaKnown RBP12.95□□□□□ -0.34
ATN1-204ENST00000541029 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
ATN1-204ENST00000541029 SDHAF1A6NFY7 115 aa12.94□□□□□ -0.34
ATN1-204ENST00000541029 APCSP02743 223 aa12.94□□□□□ -0.34
ATN1-204ENST00000541029 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
ATN1-204ENST00000541029 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
ATN1-204ENST00000541029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
ATN1-204ENST00000541029 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
ATN1-204ENST00000541029 HIGD1CA8MV81 97 aa12.93□□□□□ -0.34
ATN1-204ENST00000541029 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
ATN1-204ENST00000541029 TEX261Q6UWH6 196 aa12.93□□□□□ -0.34
ATN1-204ENST00000541029 C9orf163Q8N9P6 203 aa12.93□□□□□ -0.34
ATN1-204ENST00000541029 TSKUQ8WUA8 353 aa12.93□□□□□ -0.34
ATN1-204ENST00000541029 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
ATN1-204ENST00000541029 NCR2O95944 276 aa12.92□□□□□ -0.34
ATN1-204ENST00000541029 CLRN3Q8NCR9 226 aa12.92□□□□□ -0.34
ATN1-204ENST00000541029 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
ATN1-204ENST00000541029 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
ATN1-204ENST00000541029 A0A1B0GUT8 65 aa12.91□□□□□ -0.34
ATN1-204ENST00000541029 hDV102S1A0JD36 115 aa12.91□□□□□ -0.34
ATN1-204ENST00000541029 AMMECR1LQ6DCA0 310 aa12.91□□□□□ -0.34
ATN1-204ENST00000541029 KRTAP10-4P60372 401 aaPredicted RBP12.9□□□□□ -0.34
ATN1-204ENST00000541029 RNASEKQ6P5S7 137 aaKnown RBP12.9□□□□□ -0.34
ATN1-204ENST00000541029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.9□□□□□ -0.34
ATN1-204ENST00000541029 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
ATN1-204ENST00000541029 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
ATN1-204ENST00000541029 CNBPP62633 177 aaKnown RBP12.89□□□□□ -0.35
ATN1-204ENST00000541029 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
ATN1-204ENST00000541029 TMEM191AQ9H0A3 160 aa12.89□□□□□ -0.35
ATN1-204ENST00000541029 V9GYV3 84 aa12.89□□□□□ -0.35
ATN1-204ENST00000541029 FAM231BA6NCW3 169 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 PANO1I0J062 215 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 I3L3M4 83 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 FGF6P10767 208 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 PMCHP20382 165 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 RPS10P46783 165 aaKnown RBP12.88□□□□□ -0.35
ATN1-204ENST00000541029 ISOC2Q96AB3 205 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
ATN1-204ENST00000541029 H7C423 109 aa12.87□□□□□ -0.35
ATN1-204ENST00000541029 TSHBP01222 138 aa12.87□□□□□ -0.35
ATN1-204ENST00000541029 AMN1Q8IY45 258 aa12.87□□□□□ -0.35
ATN1-204ENST00000541029 C15orf56Q8N910 161 aa12.87□□□□□ -0.35
ATN1-204ENST00000541029 ST20Q9HBF5 79 aa12.87□□□□□ -0.35
ATN1-204ENST00000541029 C9JQL5 133 aa12.86□□□□□ -0.35
ATN1-204ENST00000541029 SLPIP03973 132 aa12.86□□□□□ -0.35
ATN1-204ENST00000541029 RAB4AP20338 218 aa12.86□□□□□ -0.35
ATN1-204ENST00000541029 RPL23P62829 140 aaKnown RBP12.86□□□□□ -0.35
ATN1-204ENST00000541029 SDIM1Q6ZPB5 146 aa12.86□□□□□ -0.35
ATN1-204ENST00000541029 NUP35Q8NFH5 326 aa12.86□□□□□ -0.35
ATN1-204ENST00000541029 AP5S1Q9NUS5 200 aa12.86□□□□□ -0.35
ATN1-204ENST00000541029 ADIRFQ15847 76 aa12.85□□□□□ -0.35
ATN1-204ENST00000541029 TMEM241Q24JQ0 296 aa12.85□□□□□ -0.35
ATN1-204ENST00000541029 CHCHD10Q8WYQ3 142 aaPredicted RBP12.85□□□□□ -0.35
ATN1-204ENST00000541029 MRAP2Q96G30 205 aa12.85□□□□□ -0.35
ATN1-204ENST00000541029 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
ATN1-204ENST00000541029 J3QL48 77 aa12.84□□□□□ -0.35
ATN1-204ENST00000541029 ZNF25P17030 456 aaPredicted RBP12.84□□□□□ -0.35
ATN1-204ENST00000541029 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
ATN1-204ENST00000541029 FAM74A3Q4VXF1 159 aa12.84□□□□□ -0.35
ATN1-204ENST00000541029 ESDP10768 282 aa12.83□□□□□ -0.36
ATN1-204ENST00000541029 RIGQ13278 110 aa12.83□□□□□ -0.36
ATN1-204ENST00000541029 NAT8Q9UHE5 227 aa12.83□□□□□ -0.36
ATN1-204ENST00000541029 IGHV3-64A0A075B6Q5 118 aa12.82□□□□□ -0.36
ATN1-204ENST00000541029 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.82□□□□□ -0.36
ATN1-204ENST00000541029 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
ATN1-204ENST00000541029 RPL37AP61513 92 aaKnown RBP12.82□□□□□ -0.36
ATN1-204ENST00000541029 HIGD2BQ4VC39 106 aa12.82□□□□□ -0.36
ATN1-204ENST00000541029 BTF3L4Q96K17 158 aa12.82□□□□□ -0.36
ATN1-204ENST00000541029 NAT8BQ9UHF3 227 aa12.82□□□□□ -0.36
ATN1-204ENST00000541029 TRBV27A0A0K0K1C4 114 aa12.81□□□□□ -0.36
ATN1-204ENST00000541029 OR5A1Q8NGJ0 315 aa12.81□□□□□ -0.36
ATN1-204ENST00000541029 TMEM101Q96IK0 257 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms