RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MRPL54Q6P161 138 aaKnown RBP6.15□□□□□ -1.42
SNHG1-215ENST00000540904 RMI2Q96E14 147 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 MRAP2Q96G30 205 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.43
SNHG1-215ENST00000540904 SDHAF1A6NFY7 115 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 SMKR1H3BMG3 65 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 UBE2L6O14933 153 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 LECT2O14960 151 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 NCR2O95944 276 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 CRPP02741 224 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 PMCHP20382 165 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 RPS10P46783 165 aaKnown RBP6.14□□□□□ -1.43
SNHG1-215ENST00000540904 Q0VG73 95 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 UQCC3Q6UW78 93 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 CLPSL2Q6UWE3 100 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 COX11Q9Y6N1 276 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 FAT2Q9NYQ8 4349 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
SNHG1-215ENST00000540904 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 A0A1B0GW15 77 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 TMEM218A2RU14 115 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 I3L3M4 83 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 MT-ND4LP03901 98 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 HBBP68871 147 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 FAM104BQ5XKR9 115 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 LINC00269Q8N2A0 174 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 Q8N814 137 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 MAPKAPK5-AS1Q8N8E1 139 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 ST20Q9HBF5 79 aa6.13□□□□□ -1.43
SNHG1-215ENST00000540904 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 A0A1B0GXF2 115 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 F8W036 122 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 APCSP02743 223 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 S100A8P05109 93 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 ADCYAP1P18509 176 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 WFDC2Q14508 124 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 MRPL51Q4U2R6 128 aaKnown RBP6.12□□□□□ -1.43
SNHG1-215ENST00000540904 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 COMMD7Q86VX2 200 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 BAALCQ8WXS3 180 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 ANAPC16Q96DE5 110 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 TMEM70Q9BUB7 260 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
SNHG1-215ENST00000540904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-215ENST00000540904 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 IGKV2-29A2NJV5 120 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-215ENST00000540904 PPP1R17O96001 155 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 CKS2P33552 79 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 MIAQ16674 131 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 NRACQ8N912 160 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 C20orf203Q8NBC4 194 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 PRR34Q9NV39 138 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 TMEM242Q9NWH2 141 aa6.11□□□□□ -1.43
SNHG1-215ENST00000540904 IGLV5-52A0A0A0MRZ9 124 aa6.1□□□□□ -1.43
SNHG1-215ENST00000540904 TSHBP01222 138 aa6.1□□□□□ -1.43
SNHG1-215ENST00000540904 POLR2KP53803 58 aaKnown RBP6.1□□□□□ -1.43
SNHG1-215ENST00000540904 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
SNHG1-215ENST00000540904 REG3AQ06141 175 aa6.1□□□□□ -1.43
SNHG1-215ENST00000540904 RNASEKQ6P5S7 137 aaKnown RBP6.1□□□□□ -1.43
SNHG1-215ENST00000540904 ATP5L2Q7Z4Y8 100 aa6.1□□□□□ -1.43
SNHG1-215ENST00000540904 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-215ENST00000540904 DNAH17Q9UFH2 4485 aa6.1□□□□□ -1.43
SNHG1-215ENST00000540904 IGLV10-54A0A075B6I4 117 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-215ENST00000540904 TRBV27A0A0K0K1C4 114 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 LINC00862A6NCI5 91 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 D6R8Y8 96 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 VCYO14598 125 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 HLA-DQA1P01909 254 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 FGF6P10767 208 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 FCER1GP30273 86 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 SEC11CQ9BY50 192 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 PKD1P98161 4303 aa6.09□□□□□ -1.43
SNHG1-215ENST00000540904 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 IGKV3OR2-268A0A0C4DH90 116 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 H7C423 109 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 TNFRSF6BO95407 300 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 GCSHP23434 173 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 NDUFA5Q16718 116 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 BTF3L4Q96K17 158 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 KIR2DL4Q99706 377 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 C20orf78Q9BR46 151 aa6.08□□□□□ -1.44
SNHG1-215ENST00000540904 TRBV24-1A0A075B6N3 115 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 TRAV8-4A0A0B4J246 113 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 C7orf77A4D0Y5 90 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 PPBPP02775 128 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 ESDP10768 282 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 KRTAP26-1Q6PEX3 210 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 ORMDL3Q8N138 153 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 CTDSP1Q9GZU7 261 aa6.07□□□□□ -1.44
SNHG1-215ENST00000540904 USP17L23D6RBM5 183 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 NPYP01303 97 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 ZNF25P17030 456 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-215ENST00000540904 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms