RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TRBV6-8A0A0A6YYG3 113 aa11.34□□□□□ -0.59
UBC-208ENST00000540700 ST20Q9HBF5 79 aa11.34□□□□□ -0.59
UBC-208ENST00000540700 HLA-DQA1P01909 254 aa11.33□□□□□ -0.6
UBC-208ENST00000540700 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
UBC-208ENST00000540700 ORMDL3Q8N138 153 aa11.33□□□□□ -0.6
UBC-208ENST00000540700 PRELID3AQ96N28 172 aa11.33□□□□□ -0.6
UBC-208ENST00000540700 TSHBP01222 138 aa11.32□□□□□ -0.6
UBC-208ENST00000540700 APCSP02743 223 aa11.32□□□□□ -0.6
UBC-208ENST00000540700 MRPL18Q9H0U6 180 aaKnown RBP11.32□□□□□ -0.6
UBC-208ENST00000540700 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
UBC-208ENST00000540700 SIVA1O15304 175 aa11.31□□□□□ -0.6
UBC-208ENST00000540700 PPBPP02775 128 aa11.31□□□□□ -0.6
UBC-208ENST00000540700 IQCJQ1A5X6 159 aa11.31□□□□□ -0.6
UBC-208ENST00000540700 MAPKAPK5-AS1Q8N8E1 139 aa11.31□□□□□ -0.6
UBC-208ENST00000540700 LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
UBC-208ENST00000540700 COLCA2A8K830 154 aa11.3□□□□□ -0.6
UBC-208ENST00000540700 I3L3M4 83 aa11.3□□□□□ -0.6
UBC-208ENST00000540700 DNAH10OSP0CZ25 163 aa11.3□□□□□ -0.6
UBC-208ENST00000540700 Q6ZR54 194 aa11.3□□□□□ -0.6
UBC-208ENST00000540700 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
UBC-208ENST00000540700 TRAV8-6A0A0B4J262 113 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 PHOX2AO14813 284 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 PPP1R17O96001 155 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 MT-ND6P03923 174 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 PMCHP20382 165 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
UBC-208ENST00000540700 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 COTL1Q14019 142 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 COX19Q49B96 90 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 NIT1Q86X76 327 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
UBC-208ENST00000540700 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 TRAPPC1Q9Y5R8 145 aa11.29□□□□□ -0.6
UBC-208ENST00000540700 IGHV1-24A0A0C4DH33 117 aa11.28□□□□□ -0.6
UBC-208ENST00000540700 IGHV3-30P01768 117 aa11.28□□□□□ -0.6
UBC-208ENST00000540700 IGHV3-33P01772 117 aa11.28□□□□□ -0.6
UBC-208ENST00000540700 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
UBC-208ENST00000540700 IGHV3-30-5P0DP03 117 aa11.28□□□□□ -0.6
UBC-208ENST00000540700 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
UBC-208ENST00000540700 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 LOC389332A0A1B0GUA5 103 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 PRSS47A8MTI9 375 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 C16orf90A8MZG2 172 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 VCYO14598 125 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 ESDP10768 282 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 GAGE6Q13070 117 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
UBC-208ENST00000540700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
UBC-208ENST00000540700 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
UBC-208ENST00000540700 S100A1P23297 94 aa11.26□□□□□ -0.61
UBC-208ENST00000540700 AMTP48728 403 aa11.26□□□□□ -0.61
UBC-208ENST00000540700 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
UBC-208ENST00000540700 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.26□□□□□ -0.61
UBC-208ENST00000540700 CHCHD5Q9BSY4 110 aa11.26□□□□□ -0.61
UBC-208ENST00000540700 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
UBC-208ENST00000540700 APOBP04114 4563 aaKnown RBP11.25□□□□□ -0.61
UBC-208ENST00000540700 TCAPO15273 167 aa11.25□□□□□ -0.61
UBC-208ENST00000540700 TMEM243Q9BU79 118 aa11.25□□□□□ -0.61
UBC-208ENST00000540700 CDK2AP2O75956 126 aa11.24□□□□□ -0.61
UBC-208ENST00000540700 C1orf134Q5TEV5 83 aa11.24□□□□□ -0.61
UBC-208ENST00000540700 Q8N976 141 aa11.24□□□□□ -0.61
UBC-208ENST00000540700 MAP1LC3AQ9H492 121 aa11.24□□□□□ -0.61
UBC-208ENST00000540700 TMEM262E9PQX1 116 aa11.23□□□□□ -0.61
UBC-208ENST00000540700 IFI27P40305 119 aaPredicted RBP11.23□□□□□ -0.61
UBC-208ENST00000540700 DMBT1Q9UGM3 2413 aaPredicted RBP11.23□□□□□ -0.61
UBC-208ENST00000540700 DNAH5Q8TE73 4624 aa11.22□□□□□ -0.61
UBC-208ENST00000540700 IGLV4-60A0A075B6I1 120 aa11.22□□□□□ -0.61
UBC-208ENST00000540700 TRGC2P03986 189 aa11.22□□□□□ -0.61
UBC-208ENST00000540700 RAB5AP20339 215 aa11.22□□□□□ -0.61
UBC-208ENST00000540700 RBX1P62877 108 aa11.22□□□□□ -0.61
UBC-208ENST00000540700 Q8N8P6 123 aa11.22□□□□□ -0.61
UBC-208ENST00000540700 FCER1GP30273 86 aa11.21□□□□□ -0.61
UBC-208ENST00000540700 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
UBC-208ENST00000540700 URB1-AS1Q96HZ7 61 aa11.21□□□□□ -0.61
UBC-208ENST00000540700 KIR2DL4Q99706 377 aa11.21□□□□□ -0.61
UBC-208ENST00000540700 TNP2Q05952 138 aa11.2□□□□□ -0.62
UBC-208ENST00000540700 C18orf32Q8TCD1 76 aa11.2□□□□□ -0.62
UBC-208ENST00000540700 A0A087WX48 190 aa11.19□□□□□ -0.62
UBC-208ENST00000540700 IBA57-AS1B1ANH7 110 aa11.19□□□□□ -0.62
UBC-208ENST00000540700 RPL39P62891 51 aaKnown RBP11.19□□□□□ -0.62
UBC-208ENST00000540700 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
UBC-208ENST00000540700 Q8N1X5 172 aa11.19□□□□□ -0.62
UBC-208ENST00000540700 KLK12Q9UKR0 248 aa11.19□□□□□ -0.62
UBC-208ENST00000540700 UBE2L6O14933 153 aa11.18□□□□□ -0.62
UBC-208ENST00000540700 FGF6P10767 208 aa11.18□□□□□ -0.62
UBC-208ENST00000540700 Q6ZRN7 208 aaPredicted RBP11.18□□□□□ -0.62
UBC-208ENST00000540700 FAM104AQ969W3 186 aa11.18□□□□□ -0.62
UBC-208ENST00000540700 LINC01546A6NGU7 62 aa11.17□□□□□ -0.62
UBC-208ENST00000540700 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
UBC-208ENST00000540700 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
UBC-208ENST00000540700 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
UBC-208ENST00000540700 A0A1B0GUV1 79 aa11.16□□□□□ -0.62
UBC-208ENST00000540700 H7C423 109 aa11.16□□□□□ -0.62
UBC-208ENST00000540700 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
UBC-208ENST00000540700 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
UBC-208ENST00000540700 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
UBC-208ENST00000540700 TRAV9-2A0A087WT02 112 aa11.15□□□□□ -0.62
UBC-208ENST00000540700 K7EP13 123 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms