RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 DEFA6Q01524 100 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 DGAT2L7PQ6IED9 249 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 NEGR1Q7Z3B1 354 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 ERASQ7Z444 233 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 TOMM6Q96B49 74 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 SCGB3A1Q96QR1 104 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 TIMM21Q9BVV7 248 aa8.34□□□□□ -1.07
VTN-202ENST00000539746 MGAM2Q2M2H8 2515 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 PKD1L1Q8TDX9 2849 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 IGLV2-18A0A075B6J9 118 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 GAGE12JA6NER3 117 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 DEFB4AO15263 64 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 PRB2P02812 416 aaPredicted RBP8.33□□□□□ -1.08
VTN-202ENST00000539746 HTN3P15516 51 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 SEC11AP67812 179 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 GAGE1Q13065 139 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 GAGE4Q13068 117 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 GAGE5Q13069 117 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 C12orf74Q32Q52 190 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 GAGE13Q4V321 117 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 PET117Q6UWS5 81 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 C2orf66Q6UXQ4 117 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 TMEM243Q9BU79 118 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 KLK5Q9Y337 293 aaPredicted RBP8.33□□□□□ -1.08
VTN-202ENST00000539746 PYGO1Q9Y3Y4 419 aa8.33□□□□□ -1.08
VTN-202ENST00000539746 TRAV8-6A0A0B4J262 113 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 NUPR2A6NF83 97 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 C20orf203Q8NBC4 194 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 CHCHD7Q9BUK0 85 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 RETNQ9HD89 108 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 CSDC2Q9Y534 153 aaKnown RBP8.32□□□□□ -1.08
VTN-202ENST00000539746 MUC4Q99102 2169 aa8.32□□□□□ -1.08
VTN-202ENST00000539746 HSBP1L1C9JCN9 74 aa8.31□□□□□ -1.08
VTN-202ENST00000539746 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
VTN-202ENST00000539746 CELA1Q9UNI1 258 aa8.31□□□□□ -1.08
VTN-202ENST00000539746 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 CCL25O15444 150 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 TSHBP01222 138 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 PRSS1P07477 247 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 PLNP26678 52 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 LINC00310P59036 64 aa8.3□□□□□ -1.08
VTN-202ENST00000539746 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 K7EP13 123 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 NUPR1O60356 82 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 KRTDAPP60985 99 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 Q6ZTC4 211 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
VTN-202ENST00000539746 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 VCX2Q9H322 139 aa8.29□□□□□ -1.08
VTN-202ENST00000539746 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
VTN-202ENST00000539746 MRPS36P82909 103 aaKnown RBP8.28□□□□□ -1.08
VTN-202ENST00000539746 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
VTN-202ENST00000539746 LELP1Q5T871 98 aa8.28□□□□□ -1.08
VTN-202ENST00000539746 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
VTN-202ENST00000539746 Q6ZSN1 163 aa8.28□□□□□ -1.08
VTN-202ENST00000539746 FAM19A2Q8N3H0 131 aa8.28□□□□□ -1.08
VTN-202ENST00000539746 CHCHD5Q9BSY4 110 aa8.28□□□□□ -1.08
VTN-202ENST00000539746 NBEAL1Q6ZS30 2694 aa8.27□□□□□ -1.08
VTN-202ENST00000539746 A0A087WX48 190 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 SYS1-DBNDD2H3BUS1 97 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 DDTP30046 118 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 CCL18P55774 89 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
VTN-202ENST00000539746 CTAG1AP78358 180 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 PMVKQ15126 192 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 LGALS9CQ6DKI2 356 aa8.27□□□□□ -1.09
VTN-202ENST00000539746 PHLDA1Q8WV24 401 aaPredicted RBP8.27□□□□□ -1.09
VTN-202ENST00000539746 A0A0J9YY99 117 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 A0A1B0GUV1 79 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 GAS8-AS1O95177 125 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 P0DMU3 169 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 FAM231AP0DMU4 169 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 FAM231CP0DMU5 169 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 DNHD1Q96M86 4753 aa8.26□□□□□ -1.09
VTN-202ENST00000539746 NOTCH1P46531 2555 aa8.25□□□□□ -1.09
VTN-202ENST00000539746 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
VTN-202ENST00000539746 HERVK_113P61574 105 aa8.25□□□□□ -1.09
VTN-202ENST00000539746 ZNF664Q8N3J9 261 aa8.25□□□□□ -1.09
VTN-202ENST00000539746 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
VTN-202ENST00000539746 TRAV9-2A0A087WT02 112 aa8.24□□□□□ -1.09
VTN-202ENST00000539746 TMEM262E9PQX1 116 aa8.24□□□□□ -1.09
VTN-202ENST00000539746 VAMP8Q9BV40 100 aa8.24□□□□□ -1.09
VTN-202ENST00000539746 IGHV3-38A0A0C4DH36 116 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 H3BRM9 83 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 DPM2O94777 84 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 C3orf79P0CE67 100 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 FGF6P10767 208 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 CDPF1Q6NVV7 123 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
VTN-202ENST00000539746 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms