RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ARHGAP5Q13017 1502 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 LAMA4Q16363 1823 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 PRDM2Q13029 1718 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 ABCA3Q99758 1704 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 TRGV1A0A0A0MS02 117 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 NAP1L6A6NFF2 107 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 F2Z2F3 143 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 GNGT2O14610 69 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 ACYP2P14621 99 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 KRTAP10-4P60372 401 aaPredicted RBP0.98□□□□□ -2.25
SNHG1-210ENST00000539303 FAM213BQ8TBF2 198 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 MGST2Q99735 147 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 WFDC6Q9BQY6 131 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 LENEPQ9Y5L5 61 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 R4GMQ9 66 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 TANC1Q9C0D5 1861 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 MAP2P11137 1827 aaKnown RBP0.98□□□□□ -2.25
SNHG1-210ENST00000539303 ABCC10Q5T3U5 1492 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 ROS1P08922 2347 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 ABCA1O95477 2261 aa0.98□□□□□ -2.25
SNHG1-210ENST00000539303 A0A096LNT2 108 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 FXYD6P3P58550 94 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 KRTDAPP60985 99 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 BAGE3Q86Y29 109 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 DYNLRB1Q9NP97 96 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 MANBALQ9NQG1 85 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 NDUFA4L2Q9NRX3 87 aa0.97□□□□□ -2.25
SNHG1-210ENST00000539303 SIPA1L3O60292 1781 aaPredicted RBP0.96□□□□□ -2.26
SNHG1-210ENST00000539303 ZDBF2Q9HCK1 2354 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 CTXND1A0A1B0GTU2 59 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 hADV29S1A0JD25 119 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 CRYM-AS1A6NIL9 109 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 CHKB-CPT1BH3BT56 60 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 K7EIL1 84 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 MT-ATP8P03928 68 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 LINC00032P0C843 101 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 CCL18P55774 89 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 RPL37P61927 97 aaKnown RBP0.96□□□□□ -2.26
SNHG1-210ENST00000539303 UBA52P62987 128 aaKnown RBP0.96□□□□□ -2.26
SNHG1-210ENST00000539303 SNHG12Q9BXW3 62 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 DPY30Q9C005 99 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 UQCR10Q9UDW1 63 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 V9GYH0 126 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 MRC1P22897 1456 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 PXDNQ92626 1479 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 TET3O43151 1660 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 SHROOM2Q13796 1616 aa0.96□□□□□ -2.26
SNHG1-210ENST00000539303 GOLGA3Q08378 1498 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 TRAV1-2A0A0B4J238 106 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 SEC11AP67812 179 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 Q0VG73 95 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 SMIM11BQ8TCY0 68 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 ABCC5O15440 1437 aa0.95□□□□□ -2.26
SNHG1-210ENST00000539303 GVQW2A0A096LPI5 108 aaPredicted RBP0.94□□□□□ -2.26
SNHG1-210ENST00000539303 LOC285095A0A1B0GVY8 99 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 M0R135 149 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 ZNF137PP52743 207 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 TMEM170BQ5T4T1 132 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 VMO1Q7Z5L0 202 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 PMCHL2Q9BQD1 86 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 VAMP8Q9BV40 100 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 BPESC1Q9GZL8 116 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 Q9H521 79 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 ZNF609O15014 1411 aa0.94□□□□□ -2.26
SNHG1-210ENST00000539303 F5P12259 2224 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 CHD1O14646 1710 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 IFT172Q9UG01 1749 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 ANKRD26Q9UPS8 1709 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 TRAV22A0A0B4J277 110 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 TMEM14DPA8MWL7 114 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 HMGN4O00479 90 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 TRAPPC2P0DI81 140 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 TRAPPC2BP0DI82 140 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 SPINK9Q5DT21 86 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 C6orf52Q5T4I8 152 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 CFAP126Q5VTH2 177 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 Q5VV11 94 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 SFTA2Q6UW10 78 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 FAM167A-AS1Q96KT0 104 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 PRO1854Q9UHT4 67 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 TOPAZ1Q8N9V7 1692 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 KNTC1P50748 2209 aa0.93□□□□□ -2.26
SNHG1-210ENST00000539303 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 FYCO1Q9BQS8 1478 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 OTOGLQ3ZCN5 2332 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 KDM5AP29375 1690 aaKnown RBP0.92□□□□□ -2.26
SNHG1-210ENST00000539303 IGLC7A0M8Q6 106 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 F8VRH5 84 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 COX6CP09669 75 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 Q6ZRX8 168 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 BAGE2Q86Y30 109 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 ZMYM4Q5VZL5 1548 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 ZNF236Q9UL36 1845 aa0.92□□□□□ -2.26
SNHG1-210ENST00000539303 GCHFRP30047 84 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 GNG2P59768 71 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 UBE2D3P61077 147 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 UBE2D2P62837 147 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 SMIM4Q8WVI0 70 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms