RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PRSS3P2Q8NHM4 247 aa16.11■□□□□ 0.17
TMEM260-202ENST00000538838 WFDC10BQ8IUB3 73 aa16.1■□□□□ 0.17
TMEM260-202ENST00000538838 CHCHD7Q9BUK0 85 aa16.09■□□□□ 0.17
TMEM260-202ENST00000538838 TMEM243Q9BU79 118 aa16.08■□□□□ 0.17
TMEM260-202ENST00000538838 TRAV8-6A0A0B4J262 113 aa16.08■□□□□ 0.16
TMEM260-202ENST00000538838 URB1-AS1Q96HZ7 61 aa16.08■□□□□ 0.16
TMEM260-202ENST00000538838 CHCHD5Q9BSY4 110 aa16.08■□□□□ 0.16
TMEM260-202ENST00000538838 UPK3BQ9BT76 320 aa16.08■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BKO60814 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BJP06899 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BOP23527 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BBP33778 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BDP58876 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BCP62807 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST2H2BEQ16778 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.07■□□□□ 0.16
TMEM260-202ENST00000538838 FA2HQ7L5A8 372 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BHQ93079 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BNQ99877 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 HIST1H2BMQ99879 126 aa16.07■□□□□ 0.16
TMEM260-202ENST00000538838 ALMS1Q8TCU4 4167 aa16.06■□□□□ 0.16
TMEM260-202ENST00000538838 C1orf196B1AJZ1 125 aa16.06■□□□□ 0.16
TMEM260-202ENST00000538838 ESDP10768 282 aa16.06■□□□□ 0.16
TMEM260-202ENST00000538838 LGALS9CQ6DKI2 356 aa16.06■□□□□ 0.16
TMEM260-202ENST00000538838 LINC00476Q8WZB0 136 aa16.06■□□□□ 0.16
TMEM260-202ENST00000538838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.05■□□□□ 0.16
TMEM260-202ENST00000538838 IGKV2-29A2NJV5 120 aaPredicted RBP16.05■□□□□ 0.16
TMEM260-202ENST00000538838 VPS13DQ5THJ4 4388 aa16.05■□□□□ 0.16
TMEM260-202ENST00000538838 Q0VG73 95 aa16.05■□□□□ 0.16
TMEM260-202ENST00000538838 RNASEKQ6P5S7 137 aaKnown RBP16.05■□□□□ 0.16
TMEM260-202ENST00000538838 NIT1Q86X76 327 aa16.05■□□□□ 0.16
TMEM260-202ENST00000538838 LINC01546A6NGU7 62 aa16.04■□□□□ 0.16
TMEM260-202ENST00000538838 LY6G6CO95867 125 aa16.04■□□□□ 0.16
TMEM260-202ENST00000538838 GAGE6Q13070 117 aa16.04■□□□□ 0.16
TMEM260-202ENST00000538838 LAGE3Q14657 143 aa16.04■□□□□ 0.16
TMEM260-202ENST00000538838 BAGE3Q86Y29 109 aa16.04■□□□□ 0.16
TMEM260-202ENST00000538838 Q8N3U1 123 aa16.04■□□□□ 0.16
TMEM260-202ENST00000538838 K7EMI3 77 aa16.03■□□□□ 0.16
TMEM260-202ENST00000538838 DNAH1Q9P2D7 4330 aa16.03■□□□□ 0.16
TMEM260-202ENST00000538838 UBE2L6O14933 153 aa16.02■□□□□ 0.16
TMEM260-202ENST00000538838 LINC00614P0C842 121 aa16.02■□□□□ 0.16
TMEM260-202ENST00000538838 ORMDL2Q53FV1 153 aa16.02■□□□□ 0.16
TMEM260-202ENST00000538838 AP5S1Q9NUS5 200 aa16.02■□□□□ 0.16
TMEM260-202ENST00000538838 SIVA1O15304 175 aa16.01■□□□□ 0.15
TMEM260-202ENST00000538838 C20orf203Q8NBC4 194 aa16.01■□□□□ 0.15
TMEM260-202ENST00000538838 TMEM262E9PQX1 116 aa16.01■□□□□ 0.15
TMEM260-202ENST00000538838 RAB5BP61020 215 aa16.01■□□□□ 0.15
TMEM260-202ENST00000538838 RPL39P62891 51 aaKnown RBP16.01■□□□□ 0.15
TMEM260-202ENST00000538838 Q9H8V8 135 aa16.01■□□□□ 0.15
TMEM260-202ENST00000538838 LINC00310P59036 64 aa16■□□□□ 0.15
TMEM260-202ENST00000538838 MPV17L2Q567V2 206 aa16■□□□□ 0.15
TMEM260-202ENST00000538838 SERF1AO75920 110 aa15.99■□□□□ 0.15
TMEM260-202ENST00000538838 IGHV3-30P01768 117 aa15.99■□□□□ 0.15
TMEM260-202ENST00000538838 IGHV3-33P01772 117 aa15.99■□□□□ 0.15
TMEM260-202ENST00000538838 IGHV3-30-3P0DP02 117 aa15.99■□□□□ 0.15
TMEM260-202ENST00000538838 IGHV3-30-5P0DP03 117 aa15.99■□□□□ 0.15
TMEM260-202ENST00000538838 DNAH10OSP0CZ25 163 aa15.98■□□□□ 0.15
TMEM260-202ENST00000538838 A0A087WX48 190 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 FGF6P10767 208 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 BTF3P20290 206 aaKnown RBP15.97■□□□□ 0.15
TMEM260-202ENST00000538838 PMCHL1Q16048 86 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 LINC01556Q5JQF7 62 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 Q8N976 141 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 CHCHD1Q96BP2 118 aaKnown RBP15.97■□□□□ 0.15
TMEM260-202ENST00000538838 H7C423 109 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 C2orf66Q6UXQ4 117 aa15.97■□□□□ 0.15
TMEM260-202ENST00000538838 RBX1P62877 108 aa15.96■□□□□ 0.15
TMEM260-202ENST00000538838 AMMECR1LQ6DCA0 310 aa15.96■□□□□ 0.15
TMEM260-202ENST00000538838 TMEM18Q96B42 140 aa15.96■□□□□ 0.15
TMEM260-202ENST00000538838 PKIAP61925 76 aa15.95■□□□□ 0.14
TMEM260-202ENST00000538838 CYSLTR1Q9Y271 337 aa15.95■□□□□ 0.14
TMEM260-202ENST00000538838 UBE2D4Q9Y2X8 147 aa15.95■□□□□ 0.14
TMEM260-202ENST00000538838 A0A096LNJ9 63 aa15.94■□□□□ 0.14
TMEM260-202ENST00000538838 NUPR1O60356 82 aa15.94■□□□□ 0.14
TMEM260-202ENST00000538838 IGLV4-60A0A075B6I1 120 aa15.94■□□□□ 0.14
TMEM260-202ENST00000538838 MRPL52Q86TS9 123 aaKnown RBP15.94■□□□□ 0.14
TMEM260-202ENST00000538838 HSBP1O75506 76 aa15.93■□□□□ 0.14
TMEM260-202ENST00000538838 NDUFA6P56556 154 aa15.93■□□□□ 0.14
TMEM260-202ENST00000538838 LCE6AA0A183 80 aa15.92■□□□□ 0.14
TMEM260-202ENST00000538838 TOMM6Q96B49 74 aa15.92■□□□□ 0.14
TMEM260-202ENST00000538838 A0A1B0GUV1 79 aa15.91■□□□□ 0.14
TMEM260-202ENST00000538838 HBDP02042 147 aa15.91■□□□□ 0.14
TMEM260-202ENST00000538838 ZNF25P17030 456 aaPredicted RBP15.91■□□□□ 0.14
TMEM260-202ENST00000538838 KRTAP1-5Q9BYS1 174 aa15.91■□□□□ 0.14
TMEM260-202ENST00000538838 G0S2P27469 103 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 FAM19A2Q8N3H0 131 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 OR5A1Q8NGJ0 315 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 TIMM21Q9BVV7 248 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 ANGP03950 147 aaKnown RBP15.9■□□□□ 0.14
TMEM260-202ENST00000538838 TMEM101Q96IK0 257 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 SPANXA1Q9NS26 97 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 KLK12Q9UKR0 248 aa15.9■□□□□ 0.14
TMEM260-202ENST00000538838 NBDYA0A0U1RRE5 68 aa15.89■□□□□ 0.13
TMEM260-202ENST00000538838 SMAGPQ0VAQ4 97 aa15.89■□□□□ 0.13
TMEM260-202ENST00000538838 COA6Q5JTJ3 125 aaKnown RBP15.89■□□□□ 0.13
TMEM260-202ENST00000538838 DGAT2L7PQ6IED9 249 aa15.89■□□□□ 0.13
TMEM260-202ENST00000538838 Q6ZUT4 128 aa15.89■□□□□ 0.13
TMEM260-202ENST00000538838 OPRPNQ99935 248 aaPredicted RBP15.88■□□□□ 0.13
TMEM260-202ENST00000538838 CSDC2Q9Y534 153 aaKnown RBP15.88■□□□□ 0.13
TMEM260-202ENST00000538838 M0R2N4 97 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms