RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 F5H697 171 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 PHOX2AO14813 284 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 SNAPINO95295 136 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 COX8CQ7Z4L0 72 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 FMC1Q96HJ9 113 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 DERL1Q9BUN8 251 aa8.87□□□□□ -0.99
SMARCA4-206ENST00000538456 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
SMARCA4-206ENST00000538456 ZNF727A8MUV8 499 aa8.86□□□□□ -0.99
SMARCA4-206ENST00000538456 SSTP61278 116 aa8.86□□□□□ -0.99
SMARCA4-206ENST00000538456 REG3AQ06141 175 aa8.86□□□□□ -0.99
SMARCA4-206ENST00000538456 RNF185Q96GF1 192 aa8.86□□□□□ -0.99
SMARCA4-206ENST00000538456 SMIM7Q9BQ49 75 aa8.86□□□□□ -0.99
SMARCA4-206ENST00000538456 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 TMEM97Q5BJF2 176 aa8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
SMARCA4-206ENST00000538456 LTAP01374 205 aa8.84□□□□□ -0.99
SMARCA4-206ENST00000538456 SLPIP03973 132 aa8.84□□□□□ -0.99
SMARCA4-206ENST00000538456 LINC01600Q96MT4 127 aa8.84□□□□□ -0.99
SMARCA4-206ENST00000538456 AKR1C3P42330 323 aa8.83□□□□□ -1
SMARCA4-206ENST00000538456 RHEBQ15382 184 aa8.83□□□□□ -1
SMARCA4-206ENST00000538456 TMEM241Q24JQ0 296 aa8.83□□□□□ -1
SMARCA4-206ENST00000538456 SPANXN1Q5VSR9 72 aa8.83□□□□□ -1
SMARCA4-206ENST00000538456 GTSF1Q8WW33 167 aa8.83□□□□□ -1
SMARCA4-206ENST00000538456 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
SMARCA4-206ENST00000538456 IGHV1-24A0A0C4DH33 117 aa8.82□□□□□ -1
SMARCA4-206ENST00000538456 RPL35P42766 123 aaKnown RBP8.82□□□□□ -1
SMARCA4-206ENST00000538456 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
SMARCA4-206ENST00000538456 IQCJQ1A5X6 159 aa8.82□□□□□ -1
SMARCA4-206ENST00000538456 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
SMARCA4-206ENST00000538456 IGKV2-24A0A0C4DH68 120 aa8.81□□□□□ -1
SMARCA4-206ENST00000538456 S100A9P06702 114 aaKnown RBP8.81□□□□□ -1
SMARCA4-206ENST00000538456 SMIM17P0DL12 118 aa8.81□□□□□ -1
SMARCA4-206ENST00000538456 RPL23P62829 140 aaKnown RBP8.81□□□□□ -1
SMARCA4-206ENST00000538456 C20orf203Q8NBC4 194 aa8.81□□□□□ -1
SMARCA4-206ENST00000538456 GFRA4Q9GZZ7 299 aa8.81□□□□□ -1
SMARCA4-206ENST00000538456 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 TRAV8-4A0A0B4J246 113 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 P01737 135 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 COX6A2Q02221 97 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 MAJINQ3KP22 176 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 CENPWQ5EE01 88 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 WDR73Q6P4I2 378 aa8.8□□□□□ -1
SMARCA4-206ENST00000538456 C7orf77A4D0Y5 90 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 SNAI2O43623 268 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 SCO1O75880 301 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 MGPP08493 103 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 GNG4P50150 75 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 ADIRFQ15847 76 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 LINC01551Q86U37 167 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 SMIM12Q96EX1 92 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 AP1S3Q96PC3 154 aa8.79□□□□□ -1
SMARCA4-206ENST00000538456 A0A0J9YXV3 536 aa8.78□□□□□ -1
SMARCA4-206ENST00000538456 GAS8-AS1O95177 125 aa8.78□□□□□ -1
SMARCA4-206ENST00000538456 CXCL1P09341 107 aa8.78□□□□□ -1
SMARCA4-206ENST00000538456 C15orf56Q8N910 161 aa8.78□□□□□ -1
SMARCA4-206ENST00000538456 TMEM243Q9BU79 118 aa8.78□□□□□ -1
SMARCA4-206ENST00000538456 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
SMARCA4-206ENST00000538456 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
SMARCA4-206ENST00000538456 OR5AL1P0C617 328 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 STPG4Q8N801 248 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 PRSS3P2Q8NHM4 247 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 OCC1Q8TAD7 63 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 ISOC2Q96AB3 205 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 CTDSP1Q9GZU7 261 aa8.77□□□□□ -1.01
SMARCA4-206ENST00000538456 IGKV3OR2-268A0A0C4DH90 116 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 M0QY20 66 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 GZMBP10144 247 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 SUMO4Q6EEV6 95 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 BAGE2Q86Y30 109 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 TMEM242Q9NWH2 141 aa8.76□□□□□ -1.01
SMARCA4-206ENST00000538456 K7EN84 100 aa8.75□□□□□ -1.01
SMARCA4-206ENST00000538456 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
SMARCA4-206ENST00000538456 REG3GQ6UW15 175 aa8.75□□□□□ -1.01
SMARCA4-206ENST00000538456 ANAPC16Q96DE5 110 aa8.75□□□□□ -1.01
SMARCA4-206ENST00000538456 MLST8Q9BVC4 326 aa8.75□□□□□ -1.01
SMARCA4-206ENST00000538456 SMCO4Q9NRQ5 59 aa8.75□□□□□ -1.01
SMARCA4-206ENST00000538456 H7C1H1 209 aa8.74□□□□□ -1.01
SMARCA4-206ENST00000538456 UBE2L6O14933 153 aa8.74□□□□□ -1.01
SMARCA4-206ENST00000538456 PPP1R2P9O14990 202 aa8.74□□□□□ -1.01
SMARCA4-206ENST00000538456 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
SMARCA4-206ENST00000538456 CFAP161Q6P656 301 aa8.74□□□□□ -1.01
SMARCA4-206ENST00000538456 BIN3Q9NQY0 253 aa8.74□□□□□ -1.01
SMARCA4-206ENST00000538456 A0A096LNI7 61 aa8.73□□□□□ -1.01
SMARCA4-206ENST00000538456 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
SMARCA4-206ENST00000538456 CBLN2Q8IUK8 224 aa8.73□□□□□ -1.01
SMARCA4-206ENST00000538456 OSTCQ9NRP0 149 aa8.73□□□□□ -1.01
SMARCA4-206ENST00000538456 AMTP48728 403 aa8.72□□□□□ -1.01
SMARCA4-206ENST00000538456 FAM231DQ6ZW35 169 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms