RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TMEM18Q96B42 140 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TMEM70Q9BUB7 260 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 IGLL5B9A064 214 aa7.49□□□□□ -1.21
TNFRSF1A-211ENST00000538363 UBE2L6O14933 153 aa7.49□□□□□ -1.21
TNFRSF1A-211ENST00000538363 AMTP48728 403 aa7.49□□□□□ -1.21
TNFRSF1A-211ENST00000538363 SMAGPQ0VAQ4 97 aa7.49□□□□□ -1.21
TNFRSF1A-211ENST00000538363 PDZD11Q5EBL8 140 aa7.49□□□□□ -1.21
TNFRSF1A-211ENST00000538363 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
TNFRSF1A-211ENST00000538363 PRSS47A8MTI9 375 aa7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 K7EMI3 77 aa7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 UBE2D3P61077 147 aa7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 UBE2D2P62837 147 aa7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 RPL32P62910 135 aaKnown RBP7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TRBV27A0A0K0K1C4 114 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 FABP4P15090 132 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 Q9UF83 564 aa7.47□□□□□ -1.21
TNFRSF1A-211ENST00000538363 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TMEM262E9PQX1 116 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 H3BNG1 76 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 HBDP02042 147 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 PMCHL1Q16048 86 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 AMMECR1LQ6DCA0 310 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 FAM19A2Q8N3H0 131 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TMEM243Q9BU79 118 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 GTSF1LQ9H1H1 148 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 CYSLTR1Q9Y271 337 aa7.46□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
TNFRSF1A-211ENST00000538363 LINC01549A6NIU2 74 aa7.45□□□□□ -1.22
TNFRSF1A-211ENST00000538363 LEPROTL1O95214 131 aa7.45□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
TNFRSF1A-211ENST00000538363 SCGB3A1Q96QR1 104 aa7.45□□□□□ -1.22
TNFRSF1A-211ENST00000538363 HSPB8Q9UJY1 196 aa7.45□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TSHBP01222 138 aa7.44□□□□□ -1.22
TNFRSF1A-211ENST00000538363 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
TNFRSF1A-211ENST00000538363 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
TNFRSF1A-211ENST00000538363 C2orf66Q6UXQ4 117 aa7.44□□□□□ -1.22
TNFRSF1A-211ENST00000538363 UBE2DNLQ8IWF7 75 aa7.44□□□□□ -1.22
TNFRSF1A-211ENST00000538363 IGLV2-18A0A075B6J9 118 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 H0Y8G0 127 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 NUPR1O60356 82 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 ATP5LO75964 103 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 CCL18P55774 89 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 Q6ZN92 141 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 DNAH9Q9NYC9 4486 aa7.43□□□□□ -1.22
TNFRSF1A-211ENST00000538363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TRBV6-8A0A0A6YYG3 113 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 PRSS1P07477 247 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 AKR1D1P51857 326 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 PKIAP61925 76 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 GAGE6Q13070 117 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 PAPPA-AS1Q5QFB9 102 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 HIST3H2BBQ8N257 126 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 URB1-AS1Q96HZ7 61 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 MAP1LC3CQ9BXW4 147 aa7.42□□□□□ -1.22
TNFRSF1A-211ENST00000538363 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
TNFRSF1A-211ENST00000538363 A0A087WX48 190 aa7.41□□□□□ -1.22
TNFRSF1A-211ENST00000538363 ESDP10768 282 aa7.41□□□□□ -1.22
TNFRSF1A-211ENST00000538363 KRTDAPP60985 99 aa7.41□□□□□ -1.22
TNFRSF1A-211ENST00000538363 C20orf203Q8NBC4 194 aa7.41□□□□□ -1.22
TNFRSF1A-211ENST00000538363 WWC2-AS2Q96NR7 200 aa7.41□□□□□ -1.22
TNFRSF1A-211ENST00000538363 STAB2Q8WWQ8 2551 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 LINC01546A6NGU7 62 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 H7C423 109 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 LELP1Q5T871 98 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 OR5A1Q8NGJ0 315 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 IFI27L1Q96BM0 104 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
TNFRSF1A-211ENST00000538363 COL7A1Q02388 2944 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 C20orf202A1L168 122 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 LINC00694P0DN24 101 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 FGF6P10767 208 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TCTAP57738 103 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 NTM-AS1Q6ZSK4 140 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 CHCHD7Q9BUK0 85 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 VCX2Q9H322 139 aa7.39□□□□□ -1.23
TNFRSF1A-211ENST00000538363 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 LINC00310P59036 64 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 ESRGQ1W209 222 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 ERASQ7Z444 233 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 HIST1H2BLQ99880 126 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms