RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 TRBV25-1A0A075B6N4 114 aa16.6■□□□□ 0.25
HMGA2-208ENST00000537429 IGHV1-24A0A0C4DH33 117 aa16.6■□□□□ 0.25
HMGA2-208ENST00000537429 TRAV8-6A0A0B4J262 113 aa16.6■□□□□ 0.25
HMGA2-208ENST00000537429 TCAPO15273 167 aa16.6■□□□□ 0.25
HMGA2-208ENST00000537429 FCER1GP30273 86 aa16.6■□□□□ 0.25
HMGA2-208ENST00000537429 PRSS3P2Q8NHM4 247 aa16.6■□□□□ 0.25
HMGA2-208ENST00000537429 AMTP48728 403 aa16.59■□□□□ 0.25
HMGA2-208ENST00000537429 LINC00476Q8WZB0 136 aa16.59■□□□□ 0.25
HMGA2-208ENST00000537429 DNAH1Q9P2D7 4330 aa16.58■□□□□ 0.24
HMGA2-208ENST00000537429 ESDP10768 282 aa16.58■□□□□ 0.24
HMGA2-208ENST00000537429 WFDC10BQ8IUB3 73 aa16.58■□□□□ 0.24
HMGA2-208ENST00000537429 CHCHD7Q9BUK0 85 aa16.58■□□□□ 0.24
HMGA2-208ENST00000537429 TMEM243Q9BU79 118 aa16.57■□□□□ 0.24
HMGA2-208ENST00000537429 K7EMI3 77 aa16.56■□□□□ 0.24
HMGA2-208ENST00000537429 Q0VG73 95 aa16.55■□□□□ 0.24
HMGA2-208ENST00000537429 URB1-AS1Q96HZ7 61 aa16.55■□□□□ 0.24
HMGA2-208ENST00000537429 LINC01546A6NGU7 62 aa16.55■□□□□ 0.24
HMGA2-208ENST00000537429 CHCHD5Q9BSY4 110 aa16.55■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BKO60814 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BJP06899 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BOP23527 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BBP33778 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BDP58876 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BCP62807 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST2H2BEQ16778 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.54■□□□□ 0.24
HMGA2-208ENST00000537429 NIT1Q86X76 327 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BHQ93079 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BNQ99877 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 HIST1H2BMQ99879 126 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 Q9H8V8 135 aa16.54■□□□□ 0.24
HMGA2-208ENST00000537429 ALMS1Q8TCU4 4167 aa16.53■□□□□ 0.24
HMGA2-208ENST00000537429 SIVA1O15304 175 aa16.53■□□□□ 0.24
HMGA2-208ENST00000537429 LINC00614P0C842 121 aa16.53■□□□□ 0.24
HMGA2-208ENST00000537429 LAGE3Q14657 143 aa16.53■□□□□ 0.24
HMGA2-208ENST00000537429 FA2HQ7L5A8 372 aa16.53■□□□□ 0.24
HMGA2-208ENST00000537429 C1orf196B1AJZ1 125 aa16.52■□□□□ 0.24
HMGA2-208ENST00000537429 ORMDL2Q53FV1 153 aa16.52■□□□□ 0.24
HMGA2-208ENST00000537429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.51■□□□□ 0.23
HMGA2-208ENST00000537429 IGKV2-29A2NJV5 120 aaPredicted RBP16.51■□□□□ 0.23
HMGA2-208ENST00000537429 TMEM262E9PQX1 116 aa16.51■□□□□ 0.23
HMGA2-208ENST00000537429 RAB5BP61020 215 aa16.51■□□□□ 0.23
HMGA2-208ENST00000537429 C20orf203Q8NBC4 194 aa16.51■□□□□ 0.23
HMGA2-208ENST00000537429 H7C423 109 aa16.5■□□□□ 0.23
HMGA2-208ENST00000537429 UBE2L6O14933 153 aa16.5■□□□□ 0.23
HMGA2-208ENST00000537429 DNAH10OSP0CZ25 163 aa16.5■□□□□ 0.23
HMGA2-208ENST00000537429 GAGE6Q13070 117 aa16.5■□□□□ 0.23
HMGA2-208ENST00000537429 AP5S1Q9NUS5 200 aa16.5■□□□□ 0.23
HMGA2-208ENST00000537429 BAGE3Q86Y29 109 aa16.5■□□□□ 0.23
HMGA2-208ENST00000537429 LINC01556Q5JQF7 62 aa16.49■□□□□ 0.23
HMGA2-208ENST00000537429 LCE6AA0A183 80 aa16.48■□□□□ 0.23
HMGA2-208ENST00000537429 PKIAP61925 76 aa16.48■□□□□ 0.23
HMGA2-208ENST00000537429 Q8N3U1 123 aa16.48■□□□□ 0.23
HMGA2-208ENST00000537429 A0A087WX48 190 aa16.47■□□□□ 0.23
HMGA2-208ENST00000537429 MPV17L2Q567V2 206 aa16.47■□□□□ 0.23
HMGA2-208ENST00000537429 RNASEKQ6P5S7 137 aaKnown RBP16.47■□□□□ 0.23
HMGA2-208ENST00000537429 TMEM18Q96B42 140 aa16.47■□□□□ 0.23
HMGA2-208ENST00000537429 CHCHD1Q96BP2 118 aaKnown RBP16.47■□□□□ 0.23
HMGA2-208ENST00000537429 IGHV3-30P01768 117 aa16.46■□□□□ 0.23
HMGA2-208ENST00000537429 IGHV3-33P01772 117 aa16.46■□□□□ 0.23
HMGA2-208ENST00000537429 IGHV3-30-3P0DP02 117 aa16.46■□□□□ 0.23
HMGA2-208ENST00000537429 IGHV3-30-5P0DP03 117 aa16.46■□□□□ 0.23
HMGA2-208ENST00000537429 RPL39P62891 51 aaKnown RBP16.46■□□□□ 0.23
HMGA2-208ENST00000537429 A0A1B0GUV1 79 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 FGF6P10767 208 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 G0S2P27469 103 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 LINC00310P59036 64 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 RBX1P62877 108 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 C2orf66Q6UXQ4 117 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 MRPL52Q86TS9 123 aaKnown RBP16.45■□□□□ 0.22
HMGA2-208ENST00000537429 Q8N976 141 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 UBE2D4Q9Y2X8 147 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 SACSQ9NZJ4 4579 aa16.45■□□□□ 0.22
HMGA2-208ENST00000537429 BTF3P20290 206 aaKnown RBP16.44■□□□□ 0.22
HMGA2-208ENST00000537429 CYSLTR1Q9Y271 337 aa16.44■□□□□ 0.22
HMGA2-208ENST00000537429 KMT2AQ03164 3969 aa16.43■□□□□ 0.22
HMGA2-208ENST00000537429 SERF1AO75920 110 aa16.43■□□□□ 0.22
HMGA2-208ENST00000537429 ZNF25P17030 456 aaPredicted RBP16.43■□□□□ 0.22
HMGA2-208ENST00000537429 AMMECR1LQ6DCA0 310 aa16.43■□□□□ 0.22
HMGA2-208ENST00000537429 IGLV4-60A0A075B6I1 120 aa16.42■□□□□ 0.22
HMGA2-208ENST00000537429 TRAV9-2A0A087WT02 112 aa16.42■□□□□ 0.22
HMGA2-208ENST00000537429 TIMM21Q9BVV7 248 aa16.42■□□□□ 0.22
HMGA2-208ENST00000537429 A0A096LNJ9 63 aa16.41■□□□□ 0.22
HMGA2-208ENST00000537429 K7EP13 123 aa16.41■□□□□ 0.22
HMGA2-208ENST00000537429 M0R2N4 97 aa16.41■□□□□ 0.22
HMGA2-208ENST00000537429 TOMM6Q96B49 74 aa16.41■□□□□ 0.22
HMGA2-208ENST00000537429 CSDC2Q9Y534 153 aaKnown RBP16.41■□□□□ 0.22
HMGA2-208ENST00000537429 NUPR1O60356 82 aa16.4■□□□□ 0.22
HMGA2-208ENST00000537429 SMAGPQ0VAQ4 97 aa16.4■□□□□ 0.22
HMGA2-208ENST00000537429 NBDYA0A0U1RRE5 68 aa16.4■□□□□ 0.22
HMGA2-208ENST00000537429 HSBP1O75506 76 aa16.4■□□□□ 0.22
HMGA2-208ENST00000537429 PMCHL1Q16048 86 aa16.4■□□□□ 0.22
HMGA2-208ENST00000537429 COA6Q5JTJ3 125 aaKnown RBP16.4■□□□□ 0.22
HMGA2-208ENST00000537429 TTC32Q5I0X7 151 aa16.39■□□□□ 0.21
HMGA2-208ENST00000537429 TMEM101Q96IK0 257 aa16.39■□□□□ 0.21
HMGA2-208ENST00000537429 KRTAP1-5Q9BYS1 174 aa16.39■□□□□ 0.21
HMGA2-208ENST00000537429 SPANXA1Q9NS26 97 aa16.39■□□□□ 0.21
HMGA2-208ENST00000537429 PYGO1Q9Y3Y4 419 aa16.39■□□□□ 0.21
HMGA2-208ENST00000537429 DNAH6Q9C0G6 4158 aa16.39■□□□□ 0.21
HMGA2-208ENST00000537429 LINC01549A6NIU2 74 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms