RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 GCSHP23434 173 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 HAMPP81172 84 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
PRKDC-207ENST00000536483 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 HIST3H2BBQ8N257 126 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 NUDT10Q8NFP7 164 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
PRKDC-207ENST00000536483 NUDT11Q96G61 164 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 XKRY2A2RUG3 117 aa8.31□□□□□ -1.08
PRKDC-207ENST00000536483 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
PRKDC-207ENST00000536483 SPANXN1Q5VSR9 72 aa8.31□□□□□ -1.08
PRKDC-207ENST00000536483 OR2D3Q8NGH3 330 aa8.31□□□□□ -1.08
PRKDC-207ENST00000536483 PACRGQ96M98 296 aaPredicted RBP8.31□□□□□ -1.08
PRKDC-207ENST00000536483 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
PRKDC-207ENST00000536483 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
PRKDC-207ENST00000536483 RNASE7Q9H1E1 156 aaKnown RBP8.31□□□□□ -1.08
PRKDC-207ENST00000536483 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
PRKDC-207ENST00000536483 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 P01737 135 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 CACNG7P62955 275 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 Q0VG73 95 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 NIT1Q86X76 327 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 FER1L6-AS1Q8NA97 138 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 C12orf57Q99622 126 aa8.3□□□□□ -1.08
PRKDC-207ENST00000536483 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
PRKDC-207ENST00000536483 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
PRKDC-207ENST00000536483 A0A1B0GW15 77 aa8.29□□□□□ -1.08
PRKDC-207ENST00000536483 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
PRKDC-207ENST00000536483 ESDP10768 282 aa8.29□□□□□ -1.08
PRKDC-207ENST00000536483 TMEM18Q96B42 140 aa8.29□□□□□ -1.08
PRKDC-207ENST00000536483 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
PRKDC-207ENST00000536483 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
PRKDC-207ENST00000536483 IGLV5-52A0A0A0MRZ9 124 aa8.28□□□□□ -1.08
PRKDC-207ENST00000536483 CTRLP40313 264 aa8.28□□□□□ -1.08
PRKDC-207ENST00000536483 TRBV6-8A0A0A6YYG3 113 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 PSCAO43653 123 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 IGHV3-30P01768 117 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 IGHV3-33P01772 117 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 IGHV3-30-3P0DP02 117 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 IGHV3-30-5P0DP03 117 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 GZMBP10144 247 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 TMEM97Q5BJF2 176 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 TMEM136Q6ZRR5 245 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
PRKDC-207ENST00000536483 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 DNAJC30Q96LL9 226 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 TM2D2Q9BX73 214 aa8.27□□□□□ -1.09
PRKDC-207ENST00000536483 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
PRKDC-207ENST00000536483 MUC21A0A0G2JKD1 596 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 M0QY20 66 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 ZNF56Q15929 161 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 LYZL1Q6UWQ5 148 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 Q8N3U1 123 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
PRKDC-207ENST00000536483 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
PRKDC-207ENST00000536483 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
PRKDC-207ENST00000536483 IFITM10A6NMD0 228 aa8.25□□□□□ -1.09
PRKDC-207ENST00000536483 H7C1H1 209 aa8.25□□□□□ -1.09
PRKDC-207ENST00000536483 APCSP02743 223 aa8.25□□□□□ -1.09
PRKDC-207ENST00000536483 OR10D4PQ8NGN7 298 aa8.25□□□□□ -1.09
PRKDC-207ENST00000536483 TMEM70Q9BUB7 260 aa8.25□□□□□ -1.09
PRKDC-207ENST00000536483 F5H697 171 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 NTF3P20783 257 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 PKIAP61925 76 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 HBBP68871 147 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 RIGQ13278 110 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 Q8N814 137 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 Q9HAA7 133 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
PRKDC-207ENST00000536483 FABP4P15090 132 aa8.23□□□□□ -1.09
PRKDC-207ENST00000536483 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
PRKDC-207ENST00000536483 NTM-AS1Q6ZSK4 140 aa8.23□□□□□ -1.09
PRKDC-207ENST00000536483 BORCS7Q96B45 105 aa8.23□□□□□ -1.09
PRKDC-207ENST00000536483 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
PRKDC-207ENST00000536483 A0A087WX48 190 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 J3QL48 77 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 SUMO4Q6EEV6 95 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
PRKDC-207ENST00000536483 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 RMI2Q96E14 147 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 TPPP3Q9BW30 176 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 NIT2Q9NQR4 276 aa8.22□□□□□ -1.09
PRKDC-207ENST00000536483 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
PRKDC-207ENST00000536483 SSTP61278 116 aa8.21□□□□□ -1.1
PRKDC-207ENST00000536483 PYY3Q5JQD4 70 aa8.21□□□□□ -1.1
PRKDC-207ENST00000536483 PGLYRP4Q96LB8 373 aa8.21□□□□□ -1.1
PRKDC-207ENST00000536483 KLK12Q9UKR0 248 aa8.21□□□□□ -1.1
PRKDC-207ENST00000536483 RAB4AP20338 218 aa8.2□□□□□ -1.1
PRKDC-207ENST00000536483 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
PRKDC-207ENST00000536483 TWIST1Q15672 202 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms