RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PEMTQ9UBM1 199 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 TRBV19A0A075B6N1 114 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 J3QQQ9 107 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 COX7CP15954 63 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 A0A0J9YY99 117 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 TRIAP1O43715 76 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 DNAL4O96015 105 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 PFN2P35080 140 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 THAP8Q8NA92 274 aa6.82□□□□□ -1.32
SF3B2-216ENST00000534765 HIVEP1P15822 2718 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV3-33P01772 117 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 IGKV3-20P01619 116 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
SF3B2-216ENST00000534765 PSMG3-AS1Q96PY0 264 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 TP53TG1Q9Y2A0 90 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 PHLDA3Q9Y5J5 127 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 IGLV11-55A0A075B6I3 123 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV1-69DA0A0B4J2H0 117 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV1-69P01742 117 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 IGHG4P01861 327 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 MSMBP08118 114 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 Q6ZSV7 163 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 C5orf56Q8N8D9 126 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 RNF125Q96EQ8 232 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 METTL26Q96S19 204 aa6.81□□□□□ -1.32
SF3B2-216ENST00000534765 TRBV12-3P01733 135 aa6.8□□□□□ -1.32
SF3B2-216ENST00000534765 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
SF3B2-216ENST00000534765 ZNF80P51504 273 aaPredicted RBP6.8□□□□□ -1.32
SF3B2-216ENST00000534765 SMIM2Q9BVW6 85 aa6.8□□□□□ -1.32
SF3B2-216ENST00000534765 ZMAT4Q9H898 229 aa6.8□□□□□ -1.32
SF3B2-216ENST00000534765 COX6B1P14854 86 aa6.8□□□□□ -1.32
SF3B2-216ENST00000534765 IGLV2-11P01706 119 aa6.8□□□□□ -1.32
SF3B2-216ENST00000534765 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
SF3B2-216ENST00000534765 ATOX1O00244 68 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 DAND5Q8N907 189 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 TMEM243Q9BU79 118 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 C19orf54Q5BKX5 351 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 RNF185Q96GF1 192 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 ICOSQ9Y6W8 199 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 A0A087WVE0 104 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV4-31P0DP07 118 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
SF3B2-216ENST00000534765 CCDC140Q96MF4 163 aa6.79□□□□□ -1.32
SF3B2-216ENST00000534765 FLNBO75369 2602 aaKnown RBP6.78□□□□□ -1.32
SF3B2-216ENST00000534765 H3BUX3 64 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 OVOL1O14753 267 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV4-59P01825 116 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
SF3B2-216ENST00000534765 C1orf195Q5TG92 126 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 U3KQK5 164 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 H7C423 109 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV3-30P01768 117 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 IGHV3-30-5P0DP03 117 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 HOXD3P31249 432 aaPredicted RBP6.78□□□□□ -1.32
SF3B2-216ENST00000534765 DEFB112Q30KQ8 113 aa6.78□□□□□ -1.32
SF3B2-216ENST00000534765 CTSGP08311 255 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 DPH3Q96FX2 82 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 Q96MF0 132 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 PYGO1Q9Y3Y4 419 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 LINC00643Q86TS7 51 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 ZNF491Q8N8L2 437 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
SF3B2-216ENST00000534765 SMR3AQ99954 134 aa6.77□□□□□ -1.33
SF3B2-216ENST00000534765 KRTAP1-1Q07627 177 aa6.76□□□□□ -1.33
SF3B2-216ENST00000534765 DEFB113Q30KQ7 82 aa6.76□□□□□ -1.33
SF3B2-216ENST00000534765 OPRPNQ99935 248 aaPredicted RBP6.76□□□□□ -1.33
SF3B2-216ENST00000534765 RNF5Q99942 180 aa6.76□□□□□ -1.33
SF3B2-216ENST00000534765 SMAD5-AS1Q9Y6J3 95 aa6.76□□□□□ -1.33
SF3B2-216ENST00000534765 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
SF3B2-216ENST00000534765 PAPPA-AS1Q5QFB9 102 aa6.76□□□□□ -1.33
SF3B2-216ENST00000534765 CLPSL1A2RUU4 121 aa6.76□□□□□ -1.33
SF3B2-216ENST00000534765 NSD1Q96L73 2696 aaPredicted RBP6.75□□□□□ -1.33
SF3B2-216ENST00000534765 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 SHANK2-AS3Q9BTD1 123 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 H3BT86 120 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 TMEM258P61165 79 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 C15orf32Q32M92 178 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 SLC25A29Q8N8R3 303 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 MPLKIPQ8TAP9 179 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 FAM19A4Q96LR4 140 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
SF3B2-216ENST00000534765 A0A0B4J2C4 111 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 A6NDX4 124 aa6.75□□□□□ -1.33
SF3B2-216ENST00000534765 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 A0A087WWL8 130 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 WIPF1O43516 503 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 FSHBP01225 129 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 B4DSR2 109 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 DEFB1P60022 68 aa6.74□□□□□ -1.33
SF3B2-216ENST00000534765 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms