RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	TAGLN2	P37802	199 aa	Known RBP	11.89	□□□□□ -0.51
CTSB-233	ENST00000534636	CTRL	P40313	264 aa		11.89	□□□□□ -0.51
CTSB-233	ENST00000534636	TWIST1	Q15672	202 aa		11.89	□□□□□ -0.51
CTSB-233	ENST00000534636	TRBV20OR9-2	A0A075B6H5	130 aa		11.88	□□□□□ -0.51
CTSB-233	ENST00000534636	CNBP	P62633	177 aa	Known RBP	11.88	□□□□□ -0.51
CTSB-233	ENST00000534636	C9orf62	Q8N4C0	152 aa		11.88	□□□□□ -0.51
CTSB-233	ENST00000534636	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.88	□□□□□ -0.51
CTSB-233	ENST00000534636	IGLV4-60	A0A075B6I1	120 aa		11.87	□□□□□ -0.51
CTSB-233	ENST00000534636	RPP21	Q9H633	154 aa	Known RBP	11.87	□□□□□ -0.51
CTSB-233	ENST00000534636	PKHD1L1	Q86WI1	4243 aa		11.87	□□□□□ -0.51
CTSB-233	ENST00000534636	IGHV3-64	A0A075B6Q5	118 aa		11.86	□□□□□ -0.51
CTSB-233	ENST00000534636	SDIM1	Q6ZPB5	146 aa		11.86	□□□□□ -0.51
CTSB-233	ENST00000534636	SMIM15	Q7Z3B0	74 aa		11.86	□□□□□ -0.51
CTSB-233	ENST00000534636	SLC51B	Q86UW2	128 aa		11.86	□□□□□ -0.51
CTSB-233	ENST00000534636	NUDT10	Q8NFP7	164 aa		11.86	□□□□□ -0.51
CTSB-233	ENST00000534636	NUDT11	Q96G61	164 aa		11.86	□□□□□ -0.51
CTSB-233	ENST00000534636	DPH3	Q96FX2	82 aa		11.85	□□□□□ -0.51
CTSB-233	ENST00000534636	CNFN	Q9BYD5	112 aa		11.85	□□□□□ -0.51
CTSB-233	ENST00000534636	AMMECR1L	Q6DCA0	310 aa		11.84	□□□□□ -0.51
CTSB-233	ENST00000534636	TCTE3	Q8IZS6	198 aa		11.84	□□□□□ -0.51
CTSB-233	ENST00000534636	GFRA4	Q9GZZ7	299 aa		11.84	□□□□□ -0.51
CTSB-233	ENST00000534636	CFAP161	Q6P656	301 aa		11.83	□□□□□ -0.52
CTSB-233	ENST00000534636	RNASE7	Q9H1E1	156 aa	Known RBP	11.83	□□□□□ -0.52
CTSB-233	ENST00000534636	TRAV26-2	A0A0B4J265	109 aa		11.82	□□□□□ -0.52
CTSB-233	ENST00000534636	IGKV3OR2-268	A0A0C4DH90	116 aa		11.82	□□□□□ -0.52
CTSB-233	ENST00000534636	PANO1	I0J062	215 aa		11.82	□□□□□ -0.52
CTSB-233	ENST00000534636	GATD1	Q8NB37	220 aa		11.82	□□□□□ -0.52
CTSB-233	ENST00000534636	NCR2	O95944	276 aa		11.81	□□□□□ -0.52
CTSB-233	ENST00000534636	APCS	P02743	223 aa		11.81	□□□□□ -0.52
CTSB-233	ENST00000534636	TEX261	Q6UWH6	196 aa		11.81	□□□□□ -0.52
CTSB-233	ENST00000534636	RNF185	Q96GF1	192 aa		11.81	□□□□□ -0.52
CTSB-233	ENST00000534636	GAGE12H	A6NDE8	117 aa		11.8	□□□□□ -0.52
CTSB-233	ENST00000534636		K7EN84	100 aa		11.8	□□□□□ -0.52
CTSB-233	ENST00000534636	CIRBP	Q14011	172 aa	Known RBP	11.8	□□□□□ -0.52
CTSB-233	ENST00000534636	HMCN2	Q8NDA2	5059 aa		11.79	□□□□□ -0.52
CTSB-233	ENST00000534636	HNRNPA3	P51991	378 aa	Known RBP	11.79	□□□□□ -0.52
CTSB-233	ENST00000534636	RNASEK	Q6P5S7	137 aa	Known RBP	11.79	□□□□□ -0.52
CTSB-233	ENST00000534636	OCC1	Q8TAD7	63 aa		11.79	□□□□□ -0.52
CTSB-233	ENST00000534636		H7C423	109 aa		11.78	□□□□□ -0.52
CTSB-233	ENST00000534636	BORCS7	Q96B45	105 aa		11.78	□□□□□ -0.52
CTSB-233	ENST00000534636	RPL39L	Q96EH5	51 aa	Known RBP	11.78	□□□□□ -0.52
CTSB-233	ENST00000534636	PLA2G2D	Q9UNK4	145 aa		11.78	□□□□□ -0.52
CTSB-233	ENST00000534636	GATC	O43716	136 aa	Known RBP	11.77	□□□□□ -0.53
CTSB-233	ENST00000534636	CHTF8	P0CG12	524 aa		11.77	□□□□□ -0.53
CTSB-233	ENST00000534636		Q6ZNX1	250 aa		11.77	□□□□□ -0.53
CTSB-233	ENST00000534636	C15orf56	Q8N910	161 aa		11.77	□□□□□ -0.53
CTSB-233	ENST00000534636	SPACA4	Q8TDM5	124 aa		11.77	□□□□□ -0.53
CTSB-233	ENST00000534636	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.76	□□□□□ -0.53
CTSB-233	ENST00000534636		A0A087WYN8	130 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	SDHAF1	A6NFY7	115 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636		A8MWL6	223 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	TMEM250	H0YL14	139 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	SLPI	P03973	132 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	HIGD2B	Q4VC39	106 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	C7orf33	Q8WU49	177 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	GTSF1	Q8WW33	167 aa		11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.76	□□□□□ -0.53
CTSB-233	ENST00000534636	ZNF25	P17030	456 aa	Predicted RBP	11.75	□□□□□ -0.53
CTSB-233	ENST00000534636	RPS10	P46783	165 aa	Known RBP	11.75	□□□□□ -0.53
CTSB-233	ENST00000534636	CEBPG	P53567	150 aa		11.75	□□□□□ -0.53
CTSB-233	ENST00000534636	BLOC1S1	P78537	153 aa		11.75	□□□□□ -0.53
CTSB-233	ENST00000534636		Q6ZRU5	148 aa		11.75	□□□□□ -0.53
CTSB-233	ENST00000534636	TMEM101	Q96IK0	257 aa		11.75	□□□□□ -0.53
CTSB-233	ENST00000534636	BTF3L4	Q96K17	158 aa		11.75	□□□□□ -0.53
CTSB-233	ENST00000534636		I3L3M4	83 aa		11.74	□□□□□ -0.53
CTSB-233	ENST00000534636	FGF6	P10767	208 aa		11.74	□□□□□ -0.53
CTSB-233	ENST00000534636	PMCH	P20382	165 aa		11.74	□□□□□ -0.53
CTSB-233	ENST00000534636	FAM231D	Q6ZW35	169 aa		11.74	□□□□□ -0.53
CTSB-233	ENST00000534636	NDUFS6	O75380	124 aa	Known RBP	11.73	□□□□□ -0.53
CTSB-233	ENST00000534636	FOXA3	P55318	350 aa	Predicted RBP	11.73	□□□□□ -0.53
CTSB-233	ENST00000534636	COX6A2	Q02221	97 aa		11.73	□□□□□ -0.53
CTSB-233	ENST00000534636	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.72	□□□□□ -0.53
CTSB-233	ENST00000534636	CT83	Q5H943	113 aa		11.72	□□□□□ -0.53
CTSB-233	ENST00000534636	ALKAL2	Q6UX46	152 aa		11.72	□□□□□ -0.53
CTSB-233	ENST00000534636	PKIG	Q9Y2B9	76 aa		11.72	□□□□□ -0.53
CTSB-233	ENST00000534636	IGKV2-24	A0A0C4DH68	120 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	MAJIN	Q3KP22	176 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	AKAP14	Q86UN6	197 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	OR5A1	Q8NGJ0	315 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	MRAP2	Q96G30	205 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	ST20	Q9HBF5	79 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	PLAC8	Q9NZF1	115 aa		11.71	□□□□□ -0.53
CTSB-233	ENST00000534636	TRBV6-5	A0A0K0K1A5	114 aa		11.7	□□□□□ -0.54
CTSB-233	ENST00000534636	XCL1	P47992	114 aa		11.7	□□□□□ -0.54
CTSB-233	ENST00000534636	FAM210A	Q96ND0	272 aa		11.7	□□□□□ -0.54
CTSB-233	ENST00000534636	PHOX2A	O14813	284 aa		11.69	□□□□□ -0.54
CTSB-233	ENST00000534636	SMIM7	Q9BQ49	75 aa		11.69	□□□□□ -0.54
CTSB-233	ENST00000534636		A0A1B0GUT8	65 aa		11.68	□□□□□ -0.54
CTSB-233	ENST00000534636	FOXI1	Q12951	378 aa		11.68	□□□□□ -0.54
CTSB-233	ENST00000534636	PRSS3P2	Q8NHM4	247 aa		11.68	□□□□□ -0.54
CTSB-233	ENST00000534636	EIF5A2	Q9GZV4	153 aa	Known RBP	11.68	□□□□□ -0.54
CTSB-233	ENST00000534636	TMEM242	Q9NWH2	141 aa		11.68	□□□□□ -0.54
CTSB-233	ENST00000534636	LINC00474	Q9P2X8	69 aa		11.68	□□□□□ -0.54
CTSB-233	ENST00000534636	HIGD1C	A8MV81	97 aa		11.67	□□□□□ -0.54
CTSB-233	ENST00000534636	SS18	Q15532	418 aa		11.67	□□□□□ -0.54
CTSB-233	ENST00000534636	TSKU	Q8WUA8	353 aa		11.67	□□□□□ -0.54
CTSB-233	ENST00000534636	TMEM191A	Q9H0A3	160 aa		11.67	□□□□□ -0.54
CTSB-233	ENST00000534636	IGHV1-58	A0A0C4DH39	117 aa		11.66	□□□□□ -0.54
CTSB-233	ENST00000534636	CCL25	O15444	150 aa		11.66	□□□□□ -0.54

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