RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FRZBQ92765 325 aa9.38□□□□□ -0.91
VPS11-205ENST00000534551 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
VPS11-205ENST00000534551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
VPS11-205ENST00000534551 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
VPS11-205ENST00000534551 TSHBP01222 138 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 NPYP01303 97 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 RBX1P62877 108 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 TMEM97Q5BJF2 176 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 SLC7A5P1Q8MH63 180 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
VPS11-205ENST00000534551 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 K7EP13 123 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 APOC3P02656 99 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 APCSP02743 223 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
VPS11-205ENST00000534551 S100A8P05109 93 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
VPS11-205ENST00000534551 PMCHP20382 165 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 LAGE3Q14657 143 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 BTF3L4Q96K17 158 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 RPS10P5Q9NQ39 176 aa9.36□□□□□ -0.91
VPS11-205ENST00000534551 I3L3M4 83 aa9.35□□□□□ -0.91
VPS11-205ENST00000534551 CKS2P33552 79 aa9.35□□□□□ -0.91
VPS11-205ENST00000534551 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
VPS11-205ENST00000534551 KRTAP10-2P60368 255 aa9.35□□□□□ -0.91
VPS11-205ENST00000534551 SUMO2P61956 95 aaKnown RBP9.35□□□□□ -0.91
VPS11-205ENST00000534551 WFDC2Q14508 124 aa9.35□□□□□ -0.91
VPS11-205ENST00000534551 NFE4Q86UQ8 179 aa9.35□□□□□ -0.91
VPS11-205ENST00000534551 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
VPS11-205ENST00000534551 UBE2L6O14933 153 aa9.34□□□□□ -0.91
VPS11-205ENST00000534551 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
VPS11-205ENST00000534551 RHEBQ15382 184 aa9.34□□□□□ -0.91
VPS11-205ENST00000534551 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
VPS11-205ENST00000534551 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
VPS11-205ENST00000534551 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 A0A087WTM6 91 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 PSCAO43653 123 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
VPS11-205ENST00000534551 TRAV8-3A0A0A6YYJ7 113 aa9.32□□□□□ -0.92
VPS11-205ENST00000534551 LECT2O14960 151 aa9.32□□□□□ -0.92
VPS11-205ENST00000534551 CRPP02741 224 aa9.32□□□□□ -0.92
VPS11-205ENST00000534551 ORMDL3Q8N138 153 aa9.32□□□□□ -0.92
VPS11-205ENST00000534551 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
VPS11-205ENST00000534551 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
VPS11-205ENST00000534551 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
VPS11-205ENST00000534551 ESDP10768 282 aa9.31□□□□□ -0.92
VPS11-205ENST00000534551 PKIAP61925 76 aa9.31□□□□□ -0.92
VPS11-205ENST00000534551 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
VPS11-205ENST00000534551 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
VPS11-205ENST00000534551 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 FGF6P10767 208 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 S100PP25815 95 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 ELOBQ15370 118 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 NDUFA5Q16718 116 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 KIAA1644Q3SXP7 199 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 RNASEKQ6P5S7 137 aaKnown RBP9.3□□□□□ -0.92
VPS11-205ENST00000534551 SVBPQ8N300 66 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
VPS11-205ENST00000534551 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 TRAV9-1A0A075B6T8 112 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 TGIF2-C20orf24A0A0A6YYL0 155 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 VCYO14598 125 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 TCAPO15273 167 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 SNAPINO95295 136 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 PPP1R17O96001 155 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 FCER1GP30273 86 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 REG3AQ06141 175 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 C20orf78Q9BR46 151 aa9.29□□□□□ -0.92
VPS11-205ENST00000534551 LOC389332A0A1B0GUA5 103 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 C16orf90A8MZG2 172 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 HLA-DQA1P01909 254 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 PPBPP02775 128 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 BAALCQ8WXS3 180 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
VPS11-205ENST00000534551 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
VPS11-205ENST00000534551 PHOX2AO14813 284 aa9.27□□□□□ -0.93
VPS11-205ENST00000534551 Q0VG73 95 aa9.27□□□□□ -0.93
VPS11-205ENST00000534551 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
VPS11-205ENST00000534551 KIR2DL4Q99706 377 aa9.27□□□□□ -0.93
VPS11-205ENST00000534551 TM2D2Q9BX73 214 aa9.27□□□□□ -0.93
VPS11-205ENST00000534551 HSPG2P98160 4391 aa9.26□□□□□ -0.93
VPS11-205ENST00000534551 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
VPS11-205ENST00000534551 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
VPS11-205ENST00000534551 MIAQ16674 131 aa9.26□□□□□ -0.93
VPS11-205ENST00000534551 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
VPS11-205ENST00000534551 RMI2Q96E14 147 aa9.26□□□□□ -0.93
VPS11-205ENST00000534551 Q6ZUT4 128 aa9.25□□□□□ -0.93
VPS11-205ENST00000534551 CBLN2Q8IUK8 224 aa9.25□□□□□ -0.93
VPS11-205ENST00000534551 Q8N814 137 aa9.25□□□□□ -0.93
VPS11-205ENST00000534551 MAP1LC3AQ9H492 121 aa9.25□□□□□ -0.93
VPS11-205ENST00000534551 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms