RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
CAPN1-228ENST00000534373 NDUFS6O75380 124 aaKnown RBP8.7□□□□□ -1.02
CAPN1-228ENST00000534373 HLA-DQA1P01909 254 aa8.7□□□□□ -1.02
CAPN1-228ENST00000534373 COTL1Q14019 142 aa8.7□□□□□ -1.02
CAPN1-228ENST00000534373 TEX261Q6UWH6 196 aa8.7□□□□□ -1.02
CAPN1-228ENST00000534373 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
CAPN1-228ENST00000534373 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
CAPN1-228ENST00000534373 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
CAPN1-228ENST00000534373 EIF5A2Q9GZV4 153 aaKnown RBP8.7□□□□□ -1.02
CAPN1-228ENST00000534373 PRSS1P07477 247 aa8.69□□□□□ -1.02
CAPN1-228ENST00000534373 FOXA3P55318 350 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-228ENST00000534373 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
CAPN1-228ENST00000534373 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
CAPN1-228ENST00000534373 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
CAPN1-228ENST00000534373 A8MWL6 223 aa8.68□□□□□ -1.02
CAPN1-228ENST00000534373 UBE2L6O14933 153 aa8.68□□□□□ -1.02
CAPN1-228ENST00000534373 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
CAPN1-228ENST00000534373 CLPSL2Q6UWE3 100 aa8.68□□□□□ -1.02
CAPN1-228ENST00000534373 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
CAPN1-228ENST00000534373 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
CAPN1-228ENST00000534373 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
CAPN1-228ENST00000534373 NCR2O95944 276 aa8.67□□□□□ -1.02
CAPN1-228ENST00000534373 AMTP48728 403 aa8.67□□□□□ -1.02
CAPN1-228ENST00000534373 CT83Q5H943 113 aa8.67□□□□□ -1.02
CAPN1-228ENST00000534373 FAM210AQ96ND0 272 aa8.67□□□□□ -1.02
CAPN1-228ENST00000534373 H7C423 109 aa8.66□□□□□ -1.02
CAPN1-228ENST00000534373 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
CAPN1-228ENST00000534373 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-228ENST00000534373 CNBPP62633 177 aaKnown RBP8.65□□□□□ -1.02
CAPN1-228ENST00000534373 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 J3QL48 77 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 BORCS7Q96B45 105 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 GFRA4Q9GZZ7 299 aa8.64□□□□□ -1.03
CAPN1-228ENST00000534373 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-228ENST00000534373 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
CAPN1-228ENST00000534373 SRP19P09132 144 aaKnown RBP8.63□□□□□ -1.03
CAPN1-228ENST00000534373 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-228ENST00000534373 AP5S1Q9NUS5 200 aa8.63□□□□□ -1.03
CAPN1-228ENST00000534373 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 ZNF727A8MUV8 499 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 TSKUQ8WUA8 353 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
CAPN1-228ENST00000534373 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
CAPN1-228ENST00000534373 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
CAPN1-228ENST00000534373 I3L3M4 83 aa8.61□□□□□ -1.03
CAPN1-228ENST00000534373 APCSP02743 223 aa8.61□□□□□ -1.03
CAPN1-228ENST00000534373 ZNF25P17030 456 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-228ENST00000534373 RAB14P61106 215 aa8.61□□□□□ -1.03
CAPN1-228ENST00000534373 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
CAPN1-228ENST00000534373 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
CAPN1-228ENST00000534373 PMCHP20382 165 aa8.6□□□□□ -1.03
CAPN1-228ENST00000534373 SRSF3P84103 164 aaKnown RBP8.6□□□□□ -1.03
CAPN1-228ENST00000534373 PEA15Q15121 130 aa8.6□□□□□ -1.03
CAPN1-228ENST00000534373 IGHV3-64A0A075B6Q5 118 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 C9JQL5 133 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 OXTP01178 125 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 FGF6P10767 208 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
CAPN1-228ENST00000534373 FAM74A3Q4VXF1 159 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 RNASEKQ6P5S7 137 aaKnown RBP8.59□□□□□ -1.03
CAPN1-228ENST00000534373 ST20Q9HBF5 79 aa8.59□□□□□ -1.03
CAPN1-228ENST00000534373 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-228ENST00000534373 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
CAPN1-228ENST00000534373 SLPIP03973 132 aa8.58□□□□□ -1.04
CAPN1-228ENST00000534373 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
CAPN1-228ENST00000534373 MRAP2Q96G30 205 aa8.58□□□□□ -1.04
CAPN1-228ENST00000534373 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
CAPN1-228ENST00000534373 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
CAPN1-228ENST00000534373 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
CAPN1-228ENST00000534373 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
CAPN1-228ENST00000534373 PPP1R17O96001 155 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 ESDP10768 282 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 RAB4AP20338 218 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
CAPN1-228ENST00000534373 ADIRFQ15847 76 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 TMEM241Q24JQ0 296 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
CAPN1-228ENST00000534373 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
CAPN1-228ENST00000534373 IGKV3OR2-268A0A0C4DH90 116 aa8.56□□□□□ -1.04
CAPN1-228ENST00000534373 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
CAPN1-228ENST00000534373 PANO1I0J062 215 aa8.56□□□□□ -1.04
CAPN1-228ENST00000534373 RIGQ13278 110 aa8.56□□□□□ -1.04
CAPN1-228ENST00000534373 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
CAPN1-228ENST00000534373 V9GYV3 84 aa8.56□□□□□ -1.04
CAPN1-228ENST00000534373 TSHBP01222 138 aa8.55□□□□□ -1.04
CAPN1-228ENST00000534373 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
CAPN1-228ENST00000534373 MRPL52Q86TS9 123 aaKnown RBP8.55□□□□□ -1.04
CAPN1-228ENST00000534373 NUP35Q8NFH5 326 aa8.55□□□□□ -1.04
CAPN1-228ENST00000534373 ISOC2Q96AB3 205 aa8.55□□□□□ -1.04
CAPN1-228ENST00000534373 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
CAPN1-228ENST00000534373 SMDT1Q9H4I9 107 aa8.55□□□□□ -1.04
CAPN1-228ENST00000534373 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms