RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 TSHBP01222 138 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 IGKV3-20P01619 116 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 IGHV3-53P01767 116 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 PROK1P58294 105 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 FAM74A4Q5TZK3 123 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 Q6ZSN1 163 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 GTF2H5Q6ZYL4 71 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 GTSCR1Q86UQ5 136 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 CEND1Q8N111 149 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 C1QTNF4Q9BXJ3 329 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 CST9LQ9H4G1 147 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 YAE1D1Q9NRH1 226 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 SPANXA1Q9NS26 97 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 TP73-AS1Q9UF72 201 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 TEX15Q9BXT5 2789 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 MXRA5Q9NR99 2828 aa4.15□□□□□ -1.75
ATPAF1-210ENST00000532925 TLN2Q9Y4G6 2542 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 TRBV7-3A0A075B6L6 115 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 K7EP13 123 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 SPRY2O43597 315 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 IGLV1-51P01701 117 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 CD28P10747 220 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 SMAGPQ0VAQ4 97 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 DAZ2Q13117 558 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 VAMP3Q15836 100 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 CFAP126Q5VTH2 177 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 NDUFA11Q86Y39 141 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 OR5A1Q8NGJ0 315 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 RNASE8Q8TDE3 154 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 TMEM263Q8WUH6 116 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 AMELXQ99217 191 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 LINC01587Q99440 93 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 CITED2Q99967 270 aaPredicted RBP4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 PRADC1Q9BSG0 188 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 TIMM21Q9BVV7 248 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 TEP1Q99973 2627 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-210ENST00000532925 FLNAP21333 2647 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 SONP18583 2426 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 TRAV8-6A0A0B4J262 113 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 TRAV4A0A0B4J268 109 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 CYSRT1A8MQ03 144 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 CCL25O15444 150 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 SMIM13P0DJ93 91 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 P0DMU3 169 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 FAM231AP0DMU4 169 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 FAM231CP0DMU5 169 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 INSL3P51460 131 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 MRPS36P82909 103 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 RNF151Q2KHN1 245 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 OR4C5Q8NGB2 326 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 PLEKHB2Q96CS7 222 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 C16orf74Q96GX8 76 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 TNFRSF18Q9Y5U5 241 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 SELENOKQ9Y6D0 94 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
ATPAF1-210ENST00000532925 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 K7EP34 96 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 LEPROTO15243 131 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 FXYD2P54710 66 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 RPL39P62891 51 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 COTL1Q14019 142 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 NEGR1Q7Z3B1 354 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 PHLDA1Q8WV24 401 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 CENPEQ02224 2701 aa4.12□□□□□ -1.75
ATPAF1-210ENST00000532925 HIVEP2P31629 2446 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 TINCRA0A1B0GVN0 87 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 A0A1W2PPM0 123 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 TMEM223A0PJW6 202 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 SAP30O75446 220 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 FABP2P12104 132 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 ZNF22P17026 224 aaPredicted RBP4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 GCSHP23434 173 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 LYRM7Q5U5X0 104 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 FAM19A3Q7Z5A8 133 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 MAPKAPK5-AS1Q8N8E1 139 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 HIST1H4GQ99525 98 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 OVOL2Q9BRP0 275 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 CHCHD7Q9BUK0 85 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 VCX2Q9H322 139 aa4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 MAP1AP78559 2803 aaPredicted RBP4.11□□□□□ -1.75
ATPAF1-210ENST00000532925 GCN1Q92616 2671 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 WNK1Q9H4A3 2382 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 A0A0J9YY99 117 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 H3BUT2 72 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 H7C423 109 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 J3QQQ9 107 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 K7EQD1 137 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 LGALS3P17931 250 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 AZU1P20160 251 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 UBE2D1P51668 147 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms