RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 K7EMI3 77 aa5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 BTF3P20290 206 aaKnown RBP5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 SNRPEP62304 92 aaKnown RBP5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 PDZD11Q5EBL8 140 aa5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 COA6Q5JTJ3 125 aaKnown RBP5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 LYPD5Q6UWN5 251 aa5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 FAM19A2Q8N3H0 131 aa5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 WWC2-AS2Q96NR7 200 aa5.9□□□□□ -1.46
NEDD8-MDP1-201ENST00000530579 TRBV25-1A0A075B6N4 114 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TRBV6-8A0A0A6YYG3 113 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 UBE2L6O14933 153 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 G0S2P27469 103 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 S100A2P29034 98 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 LINC00310P59036 64 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 ESRGQ1W209 222 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 NTM-AS1Q6ZSK4 140 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 MUC7Q8TAX7 377 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TMEM18Q96B42 140 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 CHCHD5Q9BSY4 110 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TMEM243Q9BU79 118 aa5.89□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 HUWE1Q7Z6Z7 4374 aaKnown RBP5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TRAV8-6A0A0B4J262 113 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 IGKV2-29A2NJV5 120 aaPredicted RBP5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TMEM262E9PQX1 116 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 HBDP02042 147 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 GAGE6Q13070 117 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 C20orf203Q8NBC4 194 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 CHCHD7Q9BUK0 85 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 C5orf52A6NGY3 159 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 ESDP10768 282 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 FABP4P15090 132 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 CCL18P55774 89 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TIRAPP58753 221 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 RPL39P62891 51 aaKnown RBP5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 LELP1Q5T871 98 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 AMMECR1LQ6DCA0 310 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 DGAT2L7PQ6IED9 249 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 HIST3H2BBQ8N257 126 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 APLNQ9ULZ1 77 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TENM3Q9P273 2699 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 LEPROTL1O95214 131 aa5.86□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TCTAP57738 103 aa5.86□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 SMAGPQ0VAQ4 97 aa5.86□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TOMM6Q96B49 74 aa5.86□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TMEM101Q96IK0 257 aa5.86□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 A0A096LNJ9 63 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 LINC01549A6NIU2 74 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 H7C423 109 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 FGF6P10767 208 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 UBE2DNLQ8IWF7 75 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 LINC00588Q9Y4M8 146 aa5.85□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 NACAE9PAV3 2078 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 FBN3Q75N90 2809 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 A0A087WX48 190 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 ATP5LO75964 103 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 PKIAP61925 76 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 ERASQ7Z444 233 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 OR5A1Q8NGJ0 315 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 TMEM141Q96I45 108 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 HIST1H2BLQ99880 126 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 OPRPNQ99935 248 aaPredicted RBP5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 SPANXA1Q9NS26 97 aa5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 MRPS16Q9Y3D3 137 aaKnown RBP5.84□□□□□ -1.47
NEDD8-MDP1-201ENST00000530579 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 H0Y8G0 127 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 C3orf84H3BNL1 204 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IGHV3-30P01768 117 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IGHV3-33P01772 117 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 PRSS1P07477 247 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IGHV3-30-3P0DP02 117 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IGHV3-30-5P0DP03 117 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 RBX1P62877 108 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 Q6ZN92 141 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 LINC00173Q6ZV60 143 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 WFDC10BQ8IUB3 73 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 TIMM21Q9BVV7 248 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 UBE2D4Q9Y2X8 147 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 PYGO1Q9Y3Y4 419 aa5.83□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IFITM10A6NMD0 228 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 ZNF25P17030 456 aaPredicted RBP5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 KRTDAPP60985 99 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 PAPPA-AS1Q5QFB9 102 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 CASC10Q5T4H9 136 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 MRPL52Q86TS9 123 aaKnown RBP5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 ZNF664Q8N3J9 261 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 Q8N976 141 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 PACRGQ96M98 296 aaPredicted RBP5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 TIMM17AQ99595 171 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 VCX2Q9H322 139 aa5.82□□□□□ -1.48
NEDD8-MDP1-201ENST00000530579 IGLV4-60A0A075B6I1 120 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms