RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 TSHBP01222 138 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 HLA-DQA1P01909 254 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 CBLN2Q8IUK8 224 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 PRELID3AQ96N28 172 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 CHCHD5Q9BSY4 110 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 K7EP13 123 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 PMCHP20382 165 aa14.41□□□□□ -0.1
CAPN1-220ENST00000530567 RPL32P62910 135 aaKnown RBP14.41□□□□□ -0.1
CAPN1-220ENST00000530567 FRAS1Q86XX4 4008 aa14.4□□□□□ -0.1
CAPN1-220ENST00000530567 AMTP48728 403 aa14.4□□□□□ -0.1
CAPN1-220ENST00000530567 COX19Q49B96 90 aa14.4□□□□□ -0.1
CAPN1-220ENST00000530567 TMEM243Q9BU79 118 aa14.4□□□□□ -0.1
CAPN1-220ENST00000530567 TRAV9-2A0A087WT02 112 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 VCYO14598 125 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 APCSP02743 223 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 MPV17L2Q567V2 206 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 CHCHD7Q9BUK0 85 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 SMIM2Q9BVW6 85 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 SMCO4Q9NRQ5 59 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 LAMTOR2Q9Y2Q5 125 aa14.39□□□□□ -0.11
CAPN1-220ENST00000530567 RTL8CO15255 209 aa14.38□□□□□ -0.11
CAPN1-220ENST00000530567 GAGE6Q13070 117 aa14.38□□□□□ -0.11
CAPN1-220ENST00000530567 KIAA1644Q3SXP7 199 aa14.38□□□□□ -0.11
CAPN1-220ENST00000530567 C6orf223Q8N319 242 aa14.38□□□□□ -0.11
CAPN1-220ENST00000530567 C10orf126Q8N4M7 172 aa14.38□□□□□ -0.11
CAPN1-220ENST00000530567 MT-ND6P03923 174 aa14.37□□□□□ -0.11
CAPN1-220ENST00000530567 C1orf134Q5TEV5 83 aa14.37□□□□□ -0.11
CAPN1-220ENST00000530567 A0A087WX48 190 aa14.36□□□□□ -0.11
CAPN1-220ENST00000530567 IBA57-AS1B1ANH7 110 aa14.36□□□□□ -0.11
CAPN1-220ENST00000530567 TMEM262E9PQX1 116 aa14.36□□□□□ -0.11
CAPN1-220ENST00000530567 ESDP10768 282 aa14.36□□□□□ -0.11
CAPN1-220ENST00000530567 BTF3P20290 206 aaKnown RBP14.36□□□□□ -0.11
CAPN1-220ENST00000530567 MRPL18Q9H0U6 180 aaKnown RBP14.36□□□□□ -0.11
CAPN1-220ENST00000530567 PRSS47A8MTI9 375 aa14.35□□□□□ -0.11
CAPN1-220ENST00000530567 PKIAP61925 76 aa14.35□□□□□ -0.11
CAPN1-220ENST00000530567 Q8N976 141 aa14.35□□□□□ -0.11
CAPN1-220ENST00000530567 RBX1P62877 108 aa14.34□□□□□ -0.11
CAPN1-220ENST00000530567 DNAH17Q9UFH2 4485 aa14.34□□□□□ -0.11
CAPN1-220ENST00000530567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.33□□□□□ -0.11
CAPN1-220ENST00000530567 IGKV2-29A2NJV5 120 aaPredicted RBP14.33□□□□□ -0.11
CAPN1-220ENST00000530567 LAGE3Q14657 143 aa14.33□□□□□ -0.11
CAPN1-220ENST00000530567 Q6ZRN7 208 aaPredicted RBP14.33□□□□□ -0.11
CAPN1-220ENST00000530567 KIR2DL4Q99706 377 aa14.33□□□□□ -0.11
CAPN1-220ENST00000530567 FAT2Q9NYQ8 4349 aa14.33□□□□□ -0.12
CAPN1-220ENST00000530567 MAP1LC3AQ9H492 121 aa14.32□□□□□ -0.12
CAPN1-220ENST00000530567 KLK12Q9UKR0 248 aa14.32□□□□□ -0.12
CAPN1-220ENST00000530567 FCER1GP30273 86 aa14.32□□□□□ -0.12
CAPN1-220ENST00000530567 FABP9Q0Z7S8 132 aa14.32□□□□□ -0.12
CAPN1-220ENST00000530567 ALKBH7Q9BT30 221 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-220ENST00000530567 IGLV4-60A0A075B6I1 120 aa14.31□□□□□ -0.12
CAPN1-220ENST00000530567 LOC389332A0A1B0GUA5 103 aa14.31□□□□□ -0.12
CAPN1-220ENST00000530567 A0A1B0GUV1 79 aa14.31□□□□□ -0.12
CAPN1-220ENST00000530567 UBE2L6O14933 153 aa14.31□□□□□ -0.12
CAPN1-220ENST00000530567 C20orf203Q8NBC4 194 aa14.31□□□□□ -0.12
CAPN1-220ENST00000530567 TRAPPC1Q9Y5R8 145 aa14.31□□□□□ -0.12
CAPN1-220ENST00000530567 H7C423 109 aa14.3□□□□□ -0.12
CAPN1-220ENST00000530567 TCAPO15273 167 aa14.3□□□□□ -0.12
CAPN1-220ENST00000530567 SCO1O75880 301 aa14.29□□□□□ -0.12
CAPN1-220ENST00000530567 ANGP03950 147 aaKnown RBP14.29□□□□□ -0.12
CAPN1-220ENST00000530567 FGF6P10767 208 aa14.29□□□□□ -0.12
CAPN1-220ENST00000530567 Q9HAA7 133 aa14.29□□□□□ -0.12
CAPN1-220ENST00000530567 Q8N8P6 123 aa14.28□□□□□ -0.12
CAPN1-220ENST00000530567 ENHOQ6UWT2 76 aa14.27□□□□□ -0.12
CAPN1-220ENST00000530567 NFE4Q86UQ8 179 aa14.27□□□□□ -0.12
CAPN1-220ENST00000530567 UBE2WQ96B02 151 aa14.27□□□□□ -0.12
CAPN1-220ENST00000530567 PRR34Q9NV39 138 aa14.27□□□□□ -0.12
CAPN1-220ENST00000530567 LINC00336Q6ZUF6 198 aa14.26□□□□□ -0.13
CAPN1-220ENST00000530567 TRAV8-3A0A0A6YYJ7 113 aa14.25□□□□□ -0.13
CAPN1-220ENST00000530567 COLCA2A8K830 154 aa14.25□□□□□ -0.13
CAPN1-220ENST00000530567 IFI27P40305 119 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-220ENST00000530567 MRPL52Q86TS9 123 aaKnown RBP14.25□□□□□ -0.13
CAPN1-220ENST00000530567 LINC00269Q8N2A0 174 aa14.25□□□□□ -0.13
CAPN1-220ENST00000530567 ATP6V1G1O75348 118 aa14.24□□□□□ -0.13
CAPN1-220ENST00000530567 TNP2Q05952 138 aa14.24□□□□□ -0.13
CAPN1-220ENST00000530567 AMMECR1LQ6DCA0 310 aa14.24□□□□□ -0.13
CAPN1-220ENST00000530567 CLPSL2Q6UWE3 100 aa14.24□□□□□ -0.13
CAPN1-220ENST00000530567 NXT2Q9NPJ8 142 aaKnown RBP14.24□□□□□ -0.13
CAPN1-220ENST00000530567 PRSS29PA6NIE9 313 aa14.24□□□□□ -0.13
CAPN1-220ENST00000530567 ZNF25P17030 456 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-220ENST00000530567 RNASEKQ6P5S7 137 aaKnown RBP14.24□□□□□ -0.13
CAPN1-220ENST00000530567 RAB5AP20339 215 aa14.23□□□□□ -0.13
CAPN1-220ENST00000530567 RPL39P62891 51 aaKnown RBP14.23□□□□□ -0.13
CAPN1-220ENST00000530567 UBE2D4Q9Y2X8 147 aa14.23□□□□□ -0.13
CAPN1-220ENST00000530567 REG3AQ06141 175 aa14.22□□□□□ -0.13
CAPN1-220ENST00000530567 CRPP02741 224 aa14.21□□□□□ -0.13
CAPN1-220ENST00000530567 Q0VG73 95 aa14.21□□□□□ -0.13
CAPN1-220ENST00000530567 LINC01546A6NGU7 62 aa14.2□□□□□ -0.14
CAPN1-220ENST00000530567 K7EMI3 77 aa14.2□□□□□ -0.14
CAPN1-220ENST00000530567 OR5A1Q8NGJ0 315 aa14.2□□□□□ -0.14
CAPN1-220ENST00000530567 C18orf32Q8TCD1 76 aa14.2□□□□□ -0.14
CAPN1-220ENST00000530567 TIMM21Q9BVV7 248 aa14.2□□□□□ -0.14
CAPN1-220ENST00000530567 CSDC2Q9Y534 153 aaKnown RBP14.2□□□□□ -0.14
CAPN1-220ENST00000530567 S100A1P23297 94 aa14.19□□□□□ -0.14
CAPN1-220ENST00000530567 MIAQ16674 131 aa14.19□□□□□ -0.14
CAPN1-220ENST00000530567 TMEM18Q96B42 140 aa14.19□□□□□ -0.14
CAPN1-220ENST00000530567 CDC42SE2Q9NRR3 84 aa14.19□□□□□ -0.14
CAPN1-220ENST00000530567 IGKV2D-24A0A075B6R9 120 aa14.18□□□□□ -0.14
CAPN1-220ENST00000530567 A0A1B0GVY2 172 aa14.18□□□□□ -0.14
CAPN1-220ENST00000530567 ORMDL2Q53FV1 153 aa14.18□□□□□ -0.14
CAPN1-220ENST00000530567 MAPKAPK5-AS1Q8N8E1 139 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms