RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 URB1-AS1Q96HZ7 61 aa7.39□□□□□ -1.23
SOX6-213ENST00000530378 C20orf78Q9BR46 151 aa7.39□□□□□ -1.23
SOX6-213ENST00000530378 SERF1AO75920 110 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 TSHBP01222 138 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 FCER1GP30273 86 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
SOX6-213ENST00000530378 CEMP1Q6PRD7 247 aaPredicted RBP7.38□□□□□ -1.23
SOX6-213ENST00000530378 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 I3L3M4 83 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 LINC00310P59036 64 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 NIT1Q86X76 327 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 Q8N8P6 123 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
SOX6-213ENST00000530378 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 NUPR2A6NF83 97 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 VCYO14598 125 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 NUPR1O60356 82 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 COTL1Q14019 142 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 MUC7Q8TAX7 377 aa7.37□□□□□ -1.23
SOX6-213ENST00000530378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
SOX6-213ENST00000530378 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
SOX6-213ENST00000530378 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 DAZ4Q86SG3 579 aaKnown RBP7.36□□□□□ -1.23
SOX6-213ENST00000530378 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
SOX6-213ENST00000530378 DAZ3Q9NR90 486 aaKnown RBP7.36□□□□□ -1.23
SOX6-213ENST00000530378 AMTP48728 403 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 S100A12P80511 92 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 Q0VG73 95 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 FAM19A2Q8N3H0 131 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 GTSF1LQ9H1H1 148 aa7.36□□□□□ -1.23
SOX6-213ENST00000530378 H3BNG1 76 aa7.35□□□□□ -1.23
SOX6-213ENST00000530378 LINC00614P0C842 121 aa7.35□□□□□ -1.23
SOX6-213ENST00000530378 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
SOX6-213ENST00000530378 ESRGQ1W209 222 aa7.35□□□□□ -1.23
SOX6-213ENST00000530378 C15orf53Q8NAA6 179 aa7.35□□□□□ -1.23
SOX6-213ENST00000530378 AP5S1Q9NUS5 200 aa7.35□□□□□ -1.23
SOX6-213ENST00000530378 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
SOX6-213ENST00000530378 HSBP1O75506 76 aa7.34□□□□□ -1.23
SOX6-213ENST00000530378 RPL32P62910 135 aaKnown RBP7.34□□□□□ -1.23
SOX6-213ENST00000530378 LAGE3Q14657 143 aa7.34□□□□□ -1.23
SOX6-213ENST00000530378 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
SOX6-213ENST00000530378 Q8N3U1 123 aa7.34□□□□□ -1.23
SOX6-213ENST00000530378 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
SOX6-213ENST00000530378 DNAH1Q9P2D7 4330 aa7.34□□□□□ -1.24
SOX6-213ENST00000530378 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.24
SOX6-213ENST00000530378 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.24
SOX6-213ENST00000530378 GAGE6Q13070 117 aa7.34□□□□□ -1.24
SOX6-213ENST00000530378 CHCHD5Q9BSY4 110 aa7.34□□□□□ -1.24
SOX6-213ENST00000530378 CHCHD7Q9BUK0 85 aa7.34□□□□□ -1.24
SOX6-213ENST00000530378 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
SOX6-213ENST00000530378 SNRPEP62304 92 aaKnown RBP7.33□□□□□ -1.24
SOX6-213ENST00000530378 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
SOX6-213ENST00000530378 VPS13DQ5THJ4 4388 aa7.32□□□□□ -1.24
SOX6-213ENST00000530378 A0A096LNJ9 63 aa7.32□□□□□ -1.24
SOX6-213ENST00000530378 ORMDL2Q53FV1 153 aa7.32□□□□□ -1.24
SOX6-213ENST00000530378 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
SOX6-213ENST00000530378 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
SOX6-213ENST00000530378 TMEM243Q9BU79 118 aa7.32□□□□□ -1.24
SOX6-213ENST00000530378 UBE2L6O14933 153 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
SOX6-213ENST00000530378 TNP2Q05952 138 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 SH2D6Q7Z4S9 175 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 LINC00588Q9Y4M8 146 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 HBDP02042 147 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 FABP4P15090 132 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 RNASE13Q5GAN3 156 aaKnown RBP7.31□□□□□ -1.24
SOX6-213ENST00000530378 CASC10Q5T4H9 136 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 LINC00173Q6ZV60 143 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 C20orf203Q8NBC4 194 aa7.31□□□□□ -1.24
SOX6-213ENST00000530378 LINC01546A6NGU7 62 aa7.3□□□□□ -1.24
SOX6-213ENST00000530378 ESDP10768 282 aa7.3□□□□□ -1.24
SOX6-213ENST00000530378 LELP1Q5T871 98 aa7.3□□□□□ -1.24
SOX6-213ENST00000530378 Q8N976 141 aa7.3□□□□□ -1.24
SOX6-213ENST00000530378 OPRPNQ99935 248 aaPredicted RBP7.3□□□□□ -1.24
SOX6-213ENST00000530378 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
SOX6-213ENST00000530378 IGHV3-30P01768 117 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 IGHV3-30-3P0DP02 117 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 IGHV3-30-5P0DP03 117 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 CCL18P55774 89 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 MPV17L2Q567V2 206 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 COA6Q5JTJ3 125 aaKnown RBP7.29□□□□□ -1.24
SOX6-213ENST00000530378 CYSLTR1Q9Y271 337 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 FGF6P10767 208 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 TMEM97Q5BJF2 176 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 AMMECR1LQ6DCA0 310 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 HIST3H2BBQ8N257 126 aa7.29□□□□□ -1.24
SOX6-213ENST00000530378 TRAV8-6A0A0B4J262 113 aa7.28□□□□□ -1.24
SOX6-213ENST00000530378 H0Y8G0 127 aa7.28□□□□□ -1.24
SOX6-213ENST00000530378 TOMM6Q96B49 74 aa7.28□□□□□ -1.24
SOX6-213ENST00000530378 IGKV3OR2-268A0A0C4DH90 116 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms