RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IGHV3-30P01768 117 aa11.15□□□□□ -0.63
USP47-207ENST00000527733 IGHV3-33P01772 117 aa11.15□□□□□ -0.63
USP47-207ENST00000527733 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.63
USP47-207ENST00000527733 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.63
USP47-207ENST00000527733 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
USP47-207ENST00000527733 BAALCQ8WXS3 180 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 ATXN8Q156A1 80 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 IGLV10-54A0A075B6I4 117 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 KIR2DL5BA0A0G2JN68 375 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 KIR2DL5BA0A0G2JPC4 375 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 SIVA1O15304 175 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 KIR2DL5AQ8N109 375 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 KIR2DL5BQ8NHK3 375 aa11.14□□□□□ -0.63
USP47-207ENST00000527733 TAL2Q16559 108 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 Q9H8V8 135 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 CFAP126Q5VTH2 177 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 YPEL4Q96NS1 127 aa11.13□□□□□ -0.63
USP47-207ENST00000527733 Q8N2B8 174 aa11.12□□□□□ -0.63
USP47-207ENST00000527733 EREGO14944 169 aa11.12□□□□□ -0.63
USP47-207ENST00000527733 ANKRD39Q53RE8 183 aa11.12□□□□□ -0.63
USP47-207ENST00000527733 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
USP47-207ENST00000527733 COX7A2LO14548 114 aa11.12□□□□□ -0.63
USP47-207ENST00000527733 PROK1P58294 105 aa11.12□□□□□ -0.63
USP47-207ENST00000527733 M0QY20 66 aa11.11□□□□□ -0.63
USP47-207ENST00000527733 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 SNHG12Q9BXW3 62 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 CENPEQ02224 2701 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 SPTBN5Q9NRC6 3674 aaKnown RBP11.1□□□□□ -0.63
USP47-207ENST00000527733 RS1O15537 224 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 HERV-K104P63124 156 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 RNF185Q96GF1 192 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
USP47-207ENST00000527733 ODF1Q14990 250 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 IGLL5B9A064 214 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 KLK12Q9UKR0 248 aa11.1□□□□□ -0.63
USP47-207ENST00000527733 TET2Q6N021 2002 aaPredicted RBP11.1□□□□□ -0.63
USP47-207ENST00000527733 FAM110AQ9BQ89 295 aa11.09□□□□□ -0.63
USP47-207ENST00000527733 TRBV6-4A0A1B0GX49 114 aa11.09□□□□□ -0.63
USP47-207ENST00000527733 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
USP47-207ENST00000527733 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
USP47-207ENST00000527733 OVOL2Q9BRP0 275 aa11.09□□□□□ -0.63
USP47-207ENST00000527733 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.63
USP47-207ENST00000527733 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 IL17DQ8TAD2 202 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 C11orf86A6NJI1 115 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 BVES-AS1Q5T3Y7 98 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 SPATA12Q7Z6I5 190 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 CEND1Q8N111 149 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 OPRPNQ99935 248 aaPredicted RBP11.08□□□□□ -0.64
USP47-207ENST00000527733 MGAQ8IWI9 3026 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 SOCS3O14543 225 aa11.08□□□□□ -0.64
USP47-207ENST00000527733 IGHV4-28A0A0C4DH34 117 aa11.07□□□□□ -0.64
USP47-207ENST00000527733 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
USP47-207ENST00000527733 U3KQK5 164 aa11.07□□□□□ -0.64
USP47-207ENST00000527733 HELZ2Q9BYK8 2649 aaKnown RBP11.07□□□□□ -0.64
USP47-207ENST00000527733 DEFB131BA0A096LNP1 70 aa11.07□□□□□ -0.64
USP47-207ENST00000527733 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
USP47-207ENST00000527733 FRYLO94915 3013 aa11.07□□□□□ -0.64
USP47-207ENST00000527733 PRO1854Q9UHT4 67 aa11.07□□□□□ -0.64
USP47-207ENST00000527733 PRM2P04554 102 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 Q6ZUT4 128 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 BOD1L2Q8IYS8 172 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 TRBV6-5A0A0K0K1A5 114 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 COX11Q9Y6N1 276 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 IGHV4-30-4P0DP06 118 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
USP47-207ENST00000527733 DSCAML1Q8TD84 2053 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 E9PLD3 99 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 FSHBP01225 129 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 CRYGDP07320 174 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 PIK3CD-AS1Q5SR53 167 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 TRBV27A0A0K0K1C4 114 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
USP47-207ENST00000527733 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
USP47-207ENST00000527733 CCL25O15444 150 aa11.04□□□□□ -0.64
USP47-207ENST00000527733 MYO15AQ9UKN7 3530 aa11.04□□□□□ -0.64
USP47-207ENST00000527733 DLEU1O43261 78 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 SCGB1A1P11684 91 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 IFITM1P13164 125 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
USP47-207ENST00000527733 TM2D2Q9BX73 214 aa11.02□□□□□ -0.64
USP47-207ENST00000527733 TTTY13Q9BZ97 58 aa11.02□□□□□ -0.64
USP47-207ENST00000527733 C9orf118A6NHY6 69 aa11.02□□□□□ -0.65
USP47-207ENST00000527733 UBE2V1Q13404 147 aa11.02□□□□□ -0.65
USP47-207ENST00000527733 NRACQ8N912 160 aa11.02□□□□□ -0.65
USP47-207ENST00000527733 COL27A1Q8IZC6 1860 aaPredicted RBP11.02□□□□□ -0.65
USP47-207ENST00000527733 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
USP47-207ENST00000527733 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
USP47-207ENST00000527733 LAMTOR3Q9UHA4 124 aa11.01□□□□□ -0.65
USP47-207ENST00000527733 H7C423 109 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms