RNA–Protein interactions for RNA: ENST00000525770.5

FOXRED1-204, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,427 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-204ENST00000525770 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
FOXRED1-204ENST00000525770 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
FOXRED1-204ENST00000525770 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
FOXRED1-204ENST00000525770 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
FOXRED1-204ENST00000525770 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
FOXRED1-204ENST00000525770 REG3AQ06141 175 aa9.47□□□□□ -0.89
FOXRED1-204ENST00000525770 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
FOXRED1-204ENST00000525770 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
FOXRED1-204ENST00000525770 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
FOXRED1-204ENST00000525770 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
FOXRED1-204ENST00000525770 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
FOXRED1-204ENST00000525770 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
FOXRED1-204ENST00000525770 CT83Q5H943 113 aa9.45□□□□□ -0.9
FOXRED1-204ENST00000525770 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
FOXRED1-204ENST00000525770 DGAT2L7PQ6IED9 249 aa9.45□□□□□ -0.9
FOXRED1-204ENST00000525770 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
FOXRED1-204ENST00000525770 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
FOXRED1-204ENST00000525770 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
FOXRED1-204ENST00000525770 A8MWL6 223 aa9.44□□□□□ -0.9
FOXRED1-204ENST00000525770 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
FOXRED1-204ENST00000525770 FAM210AQ96ND0 272 aa9.44□□□□□ -0.9
FOXRED1-204ENST00000525770 IGLV10-54A0A075B6I4 117 aa9.43□□□□□ -0.9
FOXRED1-204ENST00000525770 PLA2G1BP04054 148 aaKnown RBP9.43□□□□□ -0.9
FOXRED1-204ENST00000525770 COTL1Q14019 142 aa9.43□□□□□ -0.9
FOXRED1-204ENST00000525770 LINC01551Q86U37 167 aa9.43□□□□□ -0.9
FOXRED1-204ENST00000525770 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
FOXRED1-204ENST00000525770 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
FOXRED1-204ENST00000525770 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
FOXRED1-204ENST00000525770 SMDT1Q9H4I9 107 aa9.42□□□□□ -0.9
FOXRED1-204ENST00000525770 AMTP48728 403 aa9.41□□□□□ -0.9
FOXRED1-204ENST00000525770 CLRN3Q8NCR9 226 aa9.41□□□□□ -0.9
FOXRED1-204ENST00000525770 SMIM7Q9BQ49 75 aa9.41□□□□□ -0.9
FOXRED1-204ENST00000525770 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
FOXRED1-204ENST00000525770 CEBPGP53567 150 aa9.4□□□□□ -0.9
FOXRED1-204ENST00000525770 SDIM1Q6ZPB5 146 aa9.4□□□□□ -0.9
FOXRED1-204ENST00000525770 OSTCQ9NRP0 149 aa9.4□□□□□ -0.9
FOXRED1-204ENST00000525770 TRBV6-5A0A0K0K1A5 114 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 SDHAF1A6NFY7 115 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 GAS8-AS1O95177 125 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 NCR2O95944 276 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 SMIM15Q7Z3B0 74 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 H7C423 109 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 UBE2L6O14933 153 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 SLPIP03973 132 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 PEA15Q15121 130 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 TMEM191AQ9H0A3 160 aa9.39□□□□□ -0.91
FOXRED1-204ENST00000525770 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
FOXRED1-204ENST00000525770 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
FOXRED1-204ENST00000525770 PANO1I0J062 215 aa9.38□□□□□ -0.91
FOXRED1-204ENST00000525770 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
FOXRED1-204ENST00000525770 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
FOXRED1-204ENST00000525770 V9GYV3 84 aa9.38□□□□□ -0.91
FOXRED1-204ENST00000525770 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 C9JQL5 133 aa9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 I3L3M4 83 aa9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 ESDP10768 282 aa9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 POLR2KP53803 58 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 ISOC2Q96AB3 205 aa9.36□□□□□ -0.91
FOXRED1-204ENST00000525770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 hDV102S1A0JD36 115 aa9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 APCSP02743 223 aa9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 FGF6P10767 208 aa9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 RAB4AP20338 218 aa9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 RPS10P46783 165 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-204ENST00000525770 TSHBP01222 138 aa9.34□□□□□ -0.91
FOXRED1-204ENST00000525770 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
FOXRED1-204ENST00000525770 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
FOXRED1-204ENST00000525770 LRP1Q07954 4544 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-204ENST00000525770 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 LINC00862A6NCI5 91 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 GAGE12HA6NDE8 117 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 ZNF25P17030 456 aaPredicted RBP9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 RPL23P62829 140 aaKnown RBP9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 TMEM241Q24JQ0 296 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 FAM74A3Q4VXF1 159 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 AMMECR1LQ6DCA0 310 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 UQCC3Q6UW78 93 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 AMN1Q8IY45 258 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 PKHD1L1Q86WI1 4243 aa9.33□□□□□ -0.92
FOXRED1-204ENST00000525770 PMCHP20382 165 aa9.32□□□□□ -0.92
FOXRED1-204ENST00000525770 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
FOXRED1-204ENST00000525770 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
FOXRED1-204ENST00000525770 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 NRACQ8N912 160 aa9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 TMEM242Q9NWH2 141 aa9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 FOXI1Q12951 378 aa9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 RIGQ13278 110 aa9.31□□□□□ -0.92
FOXRED1-204ENST00000525770 OR5A1Q8NGJ0 315 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms