RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 I3L2K1 104 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 IGHV3-7P01780 117 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 IGLC6P0CF74 106 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 KLK9Q2XQG4 91 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 C10orf55Q5SWW7 151 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 FOXI2Q6ZQN5 318 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 GOLT1AQ6ZVE7 132 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 CCL13Q99616 98 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 SMPXQ9UHP9 88 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 KLK9Q9UKQ9 250 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 ARFGEF3Q5TH69 2177 aa3.09□□□□□ -1.91
SKP1-213ENST00000524288 ZGRF1Q86YA3 2104 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 A6NED7 52 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 EVI2AP22794 236 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 PLGLAQ15195 96 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 MRPL51Q4U2R6 128 aaKnown RBP3.08□□□□□ -1.92
SKP1-213ENST00000524288 FAM201AQ5SY85 155 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 S100A7AQ86SG5 101 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 IFI27L1Q96BM0 104 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 FAM215AQ9Y5M1 114 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 BDP1A6H8Y1 2624 aa3.08□□□□□ -1.92
SKP1-213ENST00000524288 URB1O60287 2271 aaKnown RBP3.07□□□□□ -1.92
SKP1-213ENST00000524288 EP300Q09472 2414 aaPredicted RBP3.07□□□□□ -1.92
SKP1-213ENST00000524288 TRAV8-1A0A0A6YYK1 113 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 D6R8Y8 96 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 LY6LH3BQJ8 138 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 H3BUT2 72 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 K7EIM0 57 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 SH2D1AO60880 128 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 FABP2P12104 132 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 CCL3L1P16619 93 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 ORM2P19652 201 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 CD24P25063 80 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 FCER1GP30273 86 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 IFI27P40305 119 aaPredicted RBP3.07□□□□□ -1.92
SKP1-213ENST00000524288 CRIP1P50238 77 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 MP68P56378 58 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 LYZL1Q6UWQ5 148 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 AP1S3Q96PC3 154 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 TMEM133Q9H2Q1 129 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 NXT2Q9NPJ8 142 aaKnown RBP3.07□□□□□ -1.92
SKP1-213ENST00000524288 SPCS1Q9Y6A9 102 aa3.07□□□□□ -1.92
SKP1-213ENST00000524288 ZFHX2Q9C0A1 2572 aaPredicted RBP3.06□□□□□ -1.92
SKP1-213ENST00000524288 RBAKDNA6NC62 111 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 H3BQ85 93 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 NDUFB3O43676 98 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 NDUFA3O95167 84 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 NPYP01303 97 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 SMIM13P0DJ93 91 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 INAFM2P0DMQ5 153 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 CNTFRP26992 372 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 DIAPH2-AS1Q14236 149 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 EXOC3-AS1Q8N2X6 119 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 ATP6V0E2Q8NHE4 81 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 SPANXB1Q9NS25 103 aaPredicted RBP3.06□□□□□ -1.92
SKP1-213ENST00000524288 HHLA3Q9XRX5 114 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 R4GN34 69 aa3.06□□□□□ -1.92
SKP1-213ENST00000524288 TRBV7-3A0A075B6L6 115 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 TRAV12-1A0A0B4J245 112 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 TMEM213A2RRL7 107 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 F8W1H4 67 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 BUB1B-PAK6H3BSN5 160 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 DPM2O94777 84 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 IGKCP01834 107 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 PRB1P04280 392 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 SLC25A16P16260 332 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 RPL7P18124 248 aaKnown RBP3.05□□□□□ -1.92
SKP1-213ENST00000524288 S100A7P31151 101 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 FXYD2P54710 66 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 SAMD13Q5VXD3 122 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 HCP5Q6MZN7 132 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 Q8N8P6 123 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 DEFB108BQ8NET1 73 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 ZNRF2Q8NHG8 242 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 HILPDAQ9Y5L2 63 aa3.05□□□□□ -1.92
SKP1-213ENST00000524288 TRBV25-1A0A075B6N4 114 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 IGKV2D-26A0A0A0MRZ7 120 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 ODF3BA8MYP8 253 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 H3BMM0 161 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 J3QKU1 62 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 J3QR89 54 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 K7EMI3 77 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 M0R3E3 92 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 PLNP26678 52 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 CKS2P33552 79 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 RRN3P1Q2M238 152 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 Q8N6K4 173 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 LY6G5BQ8NDX9 201 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 UBE2WQ96B02 151 aa3.04□□□□□ -1.92
SKP1-213ENST00000524288 RIF1Q5UIP0 2472 aaKnown RBP3.04□□□□□ -1.92
SKP1-213ENST00000524288 USP34Q70CQ2 3546 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 A0A087WX48 190 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 A0A1B0GV72 72 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 OOSP1A8MZH6 123 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 HRES1P13985 223 aa3.03□□□□□ -1.92
SKP1-213ENST00000524288 ZNF80P51504 273 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms