RNA–Protein interactions for RNA: ENST00000520721.1

IGHV3-22-201, Transcript of immunoglobulin heavy variable 3-22 (pseudogene), humanhuman

BASIC

Gene IGHV3-22, Length 359 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-22-201ENST00000520721 REG3AQ06141 175 aa11.18□□□□□ -0.62
IGHV3-22-201ENST00000520721 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
IGHV3-22-201ENST00000520721 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
IGHV3-22-201ENST00000520721 TMEM243Q9BU79 118 aa11.18□□□□□ -0.62
IGHV3-22-201ENST00000520721 PLA2G1BP04054 148 aaKnown RBP11.17□□□□□ -0.62
IGHV3-22-201ENST00000520721 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
IGHV3-22-201ENST00000520721 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
IGHV3-22-201ENST00000520721 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
IGHV3-22-201ENST00000520721 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
IGHV3-22-201ENST00000520721 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
IGHV3-22-201ENST00000520721 DEFB104AQ8WTQ1 72 aa11.16□□□□□ -0.62
IGHV3-22-201ENST00000520721 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
IGHV3-22-201ENST00000520721 TRAV8-4A0A0B4J246 113 aa11.14□□□□□ -0.63
IGHV3-22-201ENST00000520721 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
IGHV3-22-201ENST00000520721 COTL1Q14019 142 aa11.14□□□□□ -0.63
IGHV3-22-201ENST00000520721 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
IGHV3-22-201ENST00000520721 IGLV10-54A0A075B6I4 117 aa11.13□□□□□ -0.63
IGHV3-22-201ENST00000520721 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
IGHV3-22-201ENST00000520721 AMTP48728 403 aa11.13□□□□□ -0.63
IGHV3-22-201ENST00000520721 CT83Q5H943 113 aa11.13□□□□□ -0.63
IGHV3-22-201ENST00000520721 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
IGHV3-22-201ENST00000520721 A8MWL6 223 aa11.12□□□□□ -0.63
IGHV3-22-201ENST00000520721 CLRN3Q8NCR9 226 aa11.12□□□□□ -0.63
IGHV3-22-201ENST00000520721 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
IGHV3-22-201ENST00000520721 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
IGHV3-22-201ENST00000520721 UBE2L6O14933 153 aa11.1□□□□□ -0.63
IGHV3-22-201ENST00000520721 CNBPP62633 177 aaKnown RBP11.1□□□□□ -0.63
IGHV3-22-201ENST00000520721 TEX261Q6UWH6 196 aa11.1□□□□□ -0.63
IGHV3-22-201ENST00000520721 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
IGHV3-22-201ENST00000520721 FAM210AQ96ND0 272 aa11.1□□□□□ -0.63
IGHV3-22-201ENST00000520721 NCR2O95944 276 aa11.09□□□□□ -0.63
IGHV3-22-201ENST00000520721 CEBPGP53567 150 aa11.09□□□□□ -0.63
IGHV3-22-201ENST00000520721 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
IGHV3-22-201ENST00000520721 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
IGHV3-22-201ENST00000520721 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
IGHV3-22-201ENST00000520721 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 TRBV6-5A0A0K0K1A5 114 aa11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 KRTAP29-1A8MX34 341 aaPredicted RBP11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 PANO1I0J062 215 aa11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 SLPIP03973 132 aa11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.08□□□□□ -0.64
IGHV3-22-201ENST00000520721 A0A1B0GVG6 124 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 SDHAF1A6NFY7 115 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 H7C423 109 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 GAS8-AS1O95177 125 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 TSKUQ8WUA8 353 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 OSTCQ9NRP0 149 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
IGHV3-22-201ENST00000520721 hDV102S1A0JD36 115 aa11.06□□□□□ -0.64
IGHV3-22-201ENST00000520721 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
IGHV3-22-201ENST00000520721 ZNF727A8MUV8 499 aa11.06□□□□□ -0.64
IGHV3-22-201ENST00000520721 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
IGHV3-22-201ENST00000520721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 A0A1B0GUT8 65 aa11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 CIRBPQ14011 172 aaKnown RBP11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 TMEM191AQ9H0A3 160 aa11.05□□□□□ -0.64
IGHV3-22-201ENST00000520721 I3L3M4 83 aa11.04□□□□□ -0.64
IGHV3-22-201ENST00000520721 APCSP02743 223 aa11.04□□□□□ -0.64
IGHV3-22-201ENST00000520721 V9GYV3 84 aa11.04□□□□□ -0.64
IGHV3-22-201ENST00000520721 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 J3QL48 77 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 TSHBP01222 138 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 FGF6P10767 208 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 ESDP10768 282 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 RAB4AP20338 218 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 BORCS7Q96B45 105 aa11.03□□□□□ -0.64
IGHV3-22-201ENST00000520721 PMCHP20382 165 aa11.02□□□□□ -0.65
IGHV3-22-201ENST00000520721 RPS10P46783 165 aaKnown RBP11.02□□□□□ -0.65
IGHV3-22-201ENST00000520721 POLR2KP53803 58 aaKnown RBP11.02□□□□□ -0.65
IGHV3-22-201ENST00000520721 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
IGHV3-22-201ENST00000520721 ZNF25P17030 456 aaPredicted RBP11.01□□□□□ -0.65
IGHV3-22-201ENST00000520721 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
IGHV3-22-201ENST00000520721 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
IGHV3-22-201ENST00000520721 ISOC2Q96AB3 205 aa11.01□□□□□ -0.65
IGHV3-22-201ENST00000520721 ST20Q9HBF5 79 aa11.01□□□□□ -0.65
IGHV3-22-201ENST00000520721 IGHV3-64A0A075B6Q5 118 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 TRAV16A0A0A6YYK6 109 aaPredicted RBP11□□□□□ -0.65
IGHV3-22-201ENST00000520721 IGKV3OR2-268A0A0C4DH90 116 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 TRBV27A0A0K0K1C4 114 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 C9JQL5 133 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 AMN1Q8IY45 258 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 NUP35Q8NFH5 326 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 MRAP2Q96G30 205 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
IGHV3-22-201ENST00000520721 RPL37AP61513 92 aaKnown RBP10.99□□□□□ -0.65
IGHV3-22-201ENST00000520721 RPL23P62829 140 aaKnown RBP10.99□□□□□ -0.65
IGHV3-22-201ENST00000520721 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
IGHV3-22-201ENST00000520721 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
IGHV3-22-201ENST00000520721 OR5A1Q8NGJ0 315 aa10.99□□□□□ -0.65
IGHV3-22-201ENST00000520721 TMEM242Q9NWH2 141 aa10.99□□□□□ -0.65
IGHV3-22-201ENST00000520721 HNRNPA3P51991 378 aaKnown RBP10.98□□□□□ -0.65
IGHV3-22-201ENST00000520721 FOXI1Q12951 378 aa10.98□□□□□ -0.65
IGHV3-22-201ENST00000520721 MRPL52Q86TS9 123 aaKnown RBP10.98□□□□□ -0.65
IGHV3-22-201ENST00000520721 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
IGHV3-22-201ENST00000520721 NRACQ8N912 160 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms