RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 IGKV3D-20A0A0C4DH25 116 aa6.39□□□□□ -1.39
HDAC3-215ENST00000519474 K7EQD1 137 aa6.39□□□□□ -1.39
HDAC3-215ENST00000519474 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
HDAC3-215ENST00000519474 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
HDAC3-215ENST00000519474 IGLC3P0DOY3 106 aa6.39□□□□□ -1.39
HDAC3-215ENST00000519474 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
HDAC3-215ENST00000519474 TPT1P13693 172 aaKnown RBP6.39□□□□□ -1.39
HDAC3-215ENST00000519474 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
HDAC3-215ENST00000519474 OR10J3Q5JRS4 329 aa6.39□□□□□ -1.39
HDAC3-215ENST00000519474 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 C9JCJ5 164 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 TRGC2P03986 189 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 SEC11BP0C7V7 166 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 GYPEP15421 78 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-215ENST00000519474 TAL2Q16559 108 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 AMMECR1LQ6DCA0 310 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 C9orf85Q96MD7 179 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 ARL2-SNX15V9GYD0 113 aa6.38□□□□□ -1.39
HDAC3-215ENST00000519474 DNAH2Q9P225 4427 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 PEX7O00628 323 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 NXPH4O95158 308 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 MED14OSP0DP75 135 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 XGP55808 180 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 TTC32Q5I0X7 151 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 CFAP126Q5VTH2 177 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 Q6Q795 121 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 COX8CQ7Z4L0 72 aa6.37□□□□□ -1.39
HDAC3-215ENST00000519474 K7EP34 96 aa6.36□□□□□ -1.39
HDAC3-215ENST00000519474 Q6ZN92 141 aa6.36□□□□□ -1.39
HDAC3-215ENST00000519474 TMEM101Q96IK0 257 aa6.36□□□□□ -1.39
HDAC3-215ENST00000519474 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
HDAC3-215ENST00000519474 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 C9JAW5 83 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 VPREB1P12018 145 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 SRSF3P84103 164 aaKnown RBP6.35□□□□□ -1.39
HDAC3-215ENST00000519474 ZNF506Q5JVG8 444 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-215ENST00000519474 Q6ZSN1 163 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 SLC25A29Q8N8R3 303 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 ZC2HC1AQ96GY0 325 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 PARLQ9H300 379 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 JPT2Q9H910 190 aa6.35□□□□□ -1.39
HDAC3-215ENST00000519474 A0A087WWL8 130 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 TRBV6-1A0A0K0K1D8 114 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 UMAD1C9J7I0 102 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 LINC00315P59091 139 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 Q86TA4 180 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 TXNDC17Q9BRA2 123 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 Q9UF83 564 aa6.34□□□□□ -1.39
HDAC3-215ENST00000519474 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 SH2D1AO60880 128 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 LTAP01374 205 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 ARMS2P0C7Q2 107 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 S100A4P26447 101 aaKnown RBP6.33□□□□□ -1.4
HDAC3-215ENST00000519474 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 SEC11AP67812 179 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 CCL20P78556 96 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 PIK3CD-AS1Q5SR53 167 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 SH2D6Q7Z4S9 175 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 WFDC10BQ8IUB3 73 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 FAM213BQ8TBF2 198 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 FMC1Q96HJ9 113 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 IL36BQ9NZH7 164 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 KIAA1109Q2LD37 5005 aa6.33□□□□□ -1.4
HDAC3-215ENST00000519474 TRAV9-2A0A087WT02 112 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 A0A1B0GV50 99 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 C16orf90A8MZG2 172 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 CXCL1P09341 107 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 ASIPP42127 132 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 UBE2G1P62253 170 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 PNRC1Q12796 327 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-215ENST00000519474 ADIRFQ15847 76 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 ZFP2Q6ZN57 461 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 SPATA12Q7Z6I5 190 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 PRADC1Q9BSG0 188 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 ST20Q9HBF5 79 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 SCRT2Q9NQ03 307 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 LY96Q9Y6Y9 160 aa6.32□□□□□ -1.4
HDAC3-215ENST00000519474 PKD1P98161 4303 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 SCO2A0A1W2PP80 73 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 A8MWV9 139 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 USP17L23D6RBM5 183 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 F8W1H4 67 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 RHODO00212 210 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 MGST1P10620 155 aaKnown RBP6.31□□□□□ -1.4
HDAC3-215ENST00000519474 HINT1P49773 126 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-215ENST00000519474 CD164Q04900 197 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 LINC01559Q495D7 138 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
HDAC3-215ENST00000519474 ATP6V0E2Q8NHE4 81 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms