RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 SLC48A1Q6P1K1 146 aa3.76□□□□□ -1.81
SQLE-203ENST00000518931 Q6ZR03 302 aa3.76□□□□□ -1.81
SQLE-203ENST00000518931 Q8N814 137 aa3.76□□□□□ -1.81
SQLE-203ENST00000518931 C14orf132Q9NPU4 83 aa3.76□□□□□ -1.81
SQLE-203ENST00000518931 COL11A1P12107 1806 aaPredicted RBP3.76□□□□□ -1.81
SQLE-203ENST00000518931 TMEM14DPA8MWL7 114 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 IGLV1-47P01700 117 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 IGLV1-51P01701 117 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 IFI6P09912 130 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 UBE2D1P51668 147 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 MED12LQ86YW9 2145 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 TMEM105Q8N8V8 129 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 DYNLRB2Q8TF09 96 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 RNF5Q99942 180 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 WFDC6Q9BQY6 131 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 ZNF407Q9C0G0 2248 aa3.75□□□□□ -1.81
SQLE-203ENST00000518931 THADAQ6YHU6 1953 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 LOC107984156A0A0G2JMH3 177 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 IBA57-AS1B1ANH7 110 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 H3BVH4 76 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 BCE1O60756 84 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 FAM27BQ5VT28 67 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 ARL17AQ8IVW1 177 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 Q8IYB0 196 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 EXPH5Q8NEV8 1989 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 LCTP09848 1927 aa3.74□□□□□ -1.81
SQLE-203ENST00000518931 LTBP1Q14766 1721 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 ARID1AO14497 2285 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 IGKV2D-26A0A0A0MRZ7 120 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 TRBV6-6A0A0A6YYG2 114 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 LINC01549A6NIU2 74 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 CPSF4LA6NMK7 179 aaKnown RBP3.73□□□□□ -1.81
SQLE-203ENST00000518931 HMGN4O00479 90 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 CLPSP04118 112 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 ROMO1P60602 79 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 Q1T7F1 81 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 SPANXN5Q5MJ07 72 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 GDF5OSQ5U4N7 250 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 Q6ZQT0 140 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 NDUFA11Q86Y39 141 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 KRTAP11-1Q8IUC1 163 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 TMEM141Q96I45 108 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 CYSTM1Q9H1C7 97 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 NHSQ6T4R5 1651 aa3.73□□□□□ -1.81
SQLE-203ENST00000518931 IGLV3-12A0A075B6K2 115 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 TMSB15BA0A087X1C1 80 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 A0A096LNJ9 63 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 CRPP02741 224 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 CCKP06307 115 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 ATXN8Q156A1 80 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 Q5W150 140 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 Q6ZS52 159 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 DYNLRB1Q9NP97 96 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 MRPL35Q9NZE8 188 aaKnown RBP3.72□□□□□ -1.81
SQLE-203ENST00000518931 COL16A1Q07092 1604 aaPredicted RBP3.72□□□□□ -1.81
SQLE-203ENST00000518931 KIAA1549Q9HCM3 1950 aa3.72□□□□□ -1.81
SQLE-203ENST00000518931 DOCK9Q9BZ29 2069 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 A0A1B0GWA3 101 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 NDUFC1O43677 76 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 SPINK4O60575 86 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 ZNF22P17026 224 aaPredicted RBP3.71□□□□□ -1.82
SQLE-203ENST00000518931 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
SQLE-203ENST00000518931 RHOHQ15669 191 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 NNATQ16517 81 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 LINC01590Q5TEZ4 76 aa3.71□□□□□ -1.82
SQLE-203ENST00000518931 TRBV7-1A0A0A6YYK4 115 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 TRAV3A0A0B4J244 114 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 IGHV1-18A0A0C4DH31 117 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 PANO1I0J062 215 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 BAALC-AS2P0C853 105 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 C1orf134Q5TEV5 83 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 CASC2Q6XLA1 102 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 LINC00269Q8N2A0 174 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 TTTY10Q9BZA0 68 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 PSENENQ9NZ42 101 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 NDUFA12Q9UI09 145 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 PLXNA2O75051 1894 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 PTPRDP23468 1912 aa3.7□□□□□ -1.82
SQLE-203ENST00000518931 ARHGAP21Q5T5U3 1957 aa3.69□□□□□ -1.82
SQLE-203ENST00000518931 TEX49A0A1B0GTD5 131 aa3.69□□□□□ -1.82
SQLE-203ENST00000518931 A0A1W2PNU3 283 aaPredicted RBP3.69□□□□□ -1.82
SQLE-203ENST00000518931 GTF3C1Q12789 2109 aa3.69□□□□□ -1.82
SQLE-203ENST00000518931 DEFB106AQ8N104 65 aa3.69□□□□□ -1.82
SQLE-203ENST00000518931 LHFPL6Q9Y693 200 aa3.69□□□□□ -1.82
SQLE-203ENST00000518931 NACAE9PAV3 2078 aa3.69□□□□□ -1.82
SQLE-203ENST00000518931 NUP214P35658 2090 aaPredicted RBP3.69□□□□□ -1.82
SQLE-203ENST00000518931 TNS1Q9HBL0 1735 aaKnown RBP3.68□□□□□ -1.82
SQLE-203ENST00000518931 A0A087WSZ3 146 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 B4DSR2 109 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 E7EUB6 86 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 CCL22O00626 93 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 CISD3P0C7P0 127 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 RNASE2P10153 161 aaKnown RBP3.68□□□□□ -1.82
SQLE-203ENST00000518931 DEFA4P12838 97 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 IFI27P40305 119 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms