RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 CENPEQ02224 2701 aa12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 C18orf65Q6ZTR6 163 aa12.08□□□□□ -0.48
PCDHGA11-202ENST00000518882 FBN2P35556 2912 aa12.08□□□□□ -0.48
PCDHGA11-202ENST00000518882 A8MZ25 164 aa12.08□□□□□ -0.48
PCDHGA11-202ENST00000518882 DEFB131AP59861 70 aa12.08□□□□□ -0.48
PCDHGA11-202ENST00000518882 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
PCDHGA11-202ENST00000518882 ADAMTSL4-AS1Q5T5F5 129 aa12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 SLURP1P55000 103 aa12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 Q1RN00 199 aa12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 ZNF702PQ9H963 129 aa12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 MYO18BQ8IUG5 2567 aa12.07□□□□□ -0.48
PCDHGA11-202ENST00000518882 LINC01356Q8N9X3 169 aa12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 A0A096LNT2 108 aa12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 H3BMM0 161 aa12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 BEX4Q9NWD9 120 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
PCDHGA11-202ENST00000518882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-202ENST00000518882 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
PCDHGA11-202ENST00000518882 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-202ENST00000518882 TRIAP1O43715 76 aa12.05□□□□□ -0.48
PCDHGA11-202ENST00000518882 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
PCDHGA11-202ENST00000518882 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
PCDHGA11-202ENST00000518882 PRSS2P07478 247 aa12.04□□□□□ -0.48
PCDHGA11-202ENST00000518882 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
PCDHGA11-202ENST00000518882 M0QXV9 152 aa12.04□□□□□ -0.48
PCDHGA11-202ENST00000518882 CUBNO60494 3623 aa12.04□□□□□ -0.48
PCDHGA11-202ENST00000518882 A8MTW9 85 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 NPC2P61916 151 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 Q6ZSV7 163 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 VSIG2Q96IQ7 327 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 GEMIN7Q9H840 131 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 ATXN8Q156A1 80 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 Q5PR19 223 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
PCDHGA11-202ENST00000518882 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.48
PCDHGA11-202ENST00000518882 PIEZO1Q92508 2521 aa12.02□□□□□ -0.48
PCDHGA11-202ENST00000518882 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.49
PCDHGA11-202ENST00000518882 DSCR9P59020 149 aa12.02□□□□□ -0.49
PCDHGA11-202ENST00000518882 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA11-202ENST00000518882 SPANXDQ9BXN6 97 aa12.02□□□□□ -0.49
PCDHGA11-202ENST00000518882 SPANXCQ9NY87 97 aa12.02□□□□□ -0.49
PCDHGA11-202ENST00000518882 TEX15Q9BXT5 2789 aa12.01□□□□□ -0.49
PCDHGA11-202ENST00000518882 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
PCDHGA11-202ENST00000518882 ZNF415Q09FC8 603 aa12□□□□□ -0.49
PCDHGA11-202ENST00000518882 Q6YL49 198 aa12□□□□□ -0.49
PCDHGA11-202ENST00000518882 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
PCDHGA11-202ENST00000518882 MIAQ16674 131 aa12□□□□□ -0.49
PCDHGA11-202ENST00000518882 HIST2H2BDQ6DRA6 164 aa12□□□□□ -0.49
PCDHGA11-202ENST00000518882 C11orf72Q8NBR9 251 aa12□□□□□ -0.49
PCDHGA11-202ENST00000518882 CR1P17927 2039 aa11.99□□□□□ -0.49
PCDHGA11-202ENST00000518882 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
PCDHGA11-202ENST00000518882 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
PCDHGA11-202ENST00000518882 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
PCDHGA11-202ENST00000518882 J3QLI3 93 aa11.99□□□□□ -0.49
PCDHGA11-202ENST00000518882 ICOSQ9Y6W8 199 aa11.99□□□□□ -0.49
PCDHGA11-202ENST00000518882 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 ACACBO00763 2458 aa11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 FSHBP01225 129 aa11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 DAND5Q8N907 189 aa11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 CDKN2A-AS1Q9UH64 79 aa11.98□□□□□ -0.49
PCDHGA11-202ENST00000518882 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 AKAP9Q99996 3911 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 TRBV10-2A0A0K0K1G8 114 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 LINC01587Q99440 93 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 LINC01600Q96MT4 127 aa11.97□□□□□ -0.49
PCDHGA11-202ENST00000518882 FAM208BQ5VWN6 2430 aa11.96□□□□□ -0.49
PCDHGA11-202ENST00000518882 CITED1Q99966 193 aa11.96□□□□□ -0.49
PCDHGA11-202ENST00000518882 CACNA1AO00555 2505 aa11.96□□□□□ -0.5
PCDHGA11-202ENST00000518882 CLEC2BQ92478 149 aa11.95□□□□□ -0.5
PCDHGA11-202ENST00000518882 H7C423 109 aa11.95□□□□□ -0.5
PCDHGA11-202ENST00000518882 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 COX6A2Q02221 97 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 CRLF1O75462 422 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 RNF183Q96D59 192 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 ZNF469Q96JG9 3925 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 PTPN13Q12923 2485 aa11.94□□□□□ -0.5
PCDHGA11-202ENST00000518882 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
PCDHGA11-202ENST00000518882 WNK1Q9H4A3 2382 aa11.93□□□□□ -0.5
PCDHGA11-202ENST00000518882 RS1O15537 224 aa11.93□□□□□ -0.5
PCDHGA11-202ENST00000518882 IGHV4-31P0DP07 118 aa11.93□□□□□ -0.5
PCDHGA11-202ENST00000518882 LRRK2Q5S007 2527 aa11.93□□□□□ -0.5
PCDHGA11-202ENST00000518882 ABCA12Q86UK0 2595 aa11.92□□□□□ -0.5
PCDHGA11-202ENST00000518882 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
PCDHGA11-202ENST00000518882 C2orf82Q6UX34 121 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms