RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 LYPD5Q6UWN5 251 aa7.9□□□□□ -1.14
ARFGEF1-202ENST00000517955 SMIM2Q9BVW6 85 aa7.9□□□□□ -1.14
ARFGEF1-202ENST00000517955 NXT2Q9NPJ8 142 aaKnown RBP7.9□□□□□ -1.14
ARFGEF1-202ENST00000517955 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.15
ARFGEF1-202ENST00000517955 TENM2Q9NT68 2774 aa7.89□□□□□ -1.15
ARFGEF1-202ENST00000517955 Q0VG73 95 aa7.89□□□□□ -1.15
ARFGEF1-202ENST00000517955 Q8N8P6 123 aa7.89□□□□□ -1.15
ARFGEF1-202ENST00000517955 C18orf32Q8TCD1 76 aa7.89□□□□□ -1.15
ARFGEF1-202ENST00000517955 PMCHP20382 165 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 COTL1Q14019 142 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 IQCJQ1A5X6 159 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 ESRGQ1W209 222 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 LELP1Q5T871 98 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 ZFAND6Q6FIF0 208 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
ARFGEF1-202ENST00000517955 PLECQ15149 4684 aaKnown RBP7.87□□□□□ -1.15
ARFGEF1-202ENST00000517955 TRBV6-8A0A0A6YYG3 113 aa7.87□□□□□ -1.15
ARFGEF1-202ENST00000517955 TSHBP01222 138 aa7.87□□□□□ -1.15
ARFGEF1-202ENST00000517955 NTM-AS1Q6ZSK4 140 aa7.87□□□□□ -1.15
ARFGEF1-202ENST00000517955 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
ARFGEF1-202ENST00000517955 UPK3BQ9BT76 320 aa7.87□□□□□ -1.15
ARFGEF1-202ENST00000517955 IGHV3-38A0A0C4DH36 116 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 C1orf196B1AJZ1 125 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 H7C423 109 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 ESDP10768 282 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 IFI27P40305 119 aaPredicted RBP7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 CCL18P55774 89 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 RAB5BP61020 215 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
ARFGEF1-202ENST00000517955 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 LOC389332A0A1B0GUA5 103 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 LINC00614P0C842 121 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 ORMDL2Q53FV1 153 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 PRSS3P2Q8NHM4 247 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 LINC00588Q9Y4M8 146 aa7.85□□□□□ -1.15
ARFGEF1-202ENST00000517955 G0S2P27469 103 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 FCER1GP30273 86 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 PKIAP61925 76 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 LAGE3Q14657 143 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 COA6Q5JTJ3 125 aaKnown RBP7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 NIT1Q86X76 327 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 URB1-AS1Q96HZ7 61 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 CHCHD7Q9BUK0 85 aa7.84□□□□□ -1.15
ARFGEF1-202ENST00000517955 TRAV8-6A0A0B4J262 113 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 LINC01549A6NIU2 74 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 AMTP48728 403 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 FA2HQ7L5A8 372 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 C20orf203Q8NBC4 194 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
ARFGEF1-202ENST00000517955 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
ARFGEF1-202ENST00000517955 BAGE3Q86Y29 109 aa7.82□□□□□ -1.16
ARFGEF1-202ENST00000517955 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
ARFGEF1-202ENST00000517955 LYSTQ99698 3801 aa7.82□□□□□ -1.16
ARFGEF1-202ENST00000517955 K7EP13 123 aa7.81□□□□□ -1.16
ARFGEF1-202ENST00000517955 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
ARFGEF1-202ENST00000517955 MRPL52Q86TS9 123 aaKnown RBP7.81□□□□□ -1.16
ARFGEF1-202ENST00000517955 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
ARFGEF1-202ENST00000517955 CSDC2Q9Y534 153 aaKnown RBP7.81□□□□□ -1.16
ARFGEF1-202ENST00000517955 NPSP0C0P6 89 aa7.8□□□□□ -1.16
ARFGEF1-202ENST00000517955 ZNF25P17030 456 aaPredicted RBP7.8□□□□□ -1.16
ARFGEF1-202ENST00000517955 LINC00310P59036 64 aa7.8□□□□□ -1.16
ARFGEF1-202ENST00000517955 SMAGPQ0VAQ4 97 aa7.8□□□□□ -1.16
ARFGEF1-202ENST00000517955 LINC01556Q5JQF7 62 aa7.8□□□□□ -1.16
ARFGEF1-202ENST00000517955 PYGO1Q9Y3Y4 419 aa7.8□□□□□ -1.16
ARFGEF1-202ENST00000517955 SIVA1O15304 175 aa7.79□□□□□ -1.16
ARFGEF1-202ENST00000517955 SERF1AO75920 110 aa7.79□□□□□ -1.16
ARFGEF1-202ENST00000517955 TOMM6Q96B49 74 aa7.79□□□□□ -1.16
ARFGEF1-202ENST00000517955 CHCHD5Q9BSY4 110 aa7.79□□□□□ -1.16
ARFGEF1-202ENST00000517955 Q9H8V8 135 aa7.79□□□□□ -1.16
ARFGEF1-202ENST00000517955 CYSLTR1Q9Y271 337 aa7.79□□□□□ -1.16
ARFGEF1-202ENST00000517955 A0A096LNJ9 63 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 UBE2L6O14933 153 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 C2orf66Q6UXQ4 117 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 WFDC10BQ8IUB3 73 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 DEFB104AQ8WTQ1 72 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 SPANXA1Q9NS26 97 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
ARFGEF1-202ENST00000517955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 IGKV2-29A2NJV5 120 aaPredicted RBP7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 IGIPA6NJ69 53 aa7.77□□□□□ -1.17
ARFGEF1-202ENST00000517955 NUPR1O60356 82 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms