RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 SPXQ9BT56 116 aa12.33□□□□□ -0.44
TSPAN17-209ENST00000515708 SLC25A20O43772 301 aa12.32□□□□□ -0.44
TSPAN17-209ENST00000515708 HTN1P15515 57 aa12.32□□□□□ -0.44
TSPAN17-209ENST00000515708 BBC3Q96PG8 261 aaPredicted RBP12.32□□□□□ -0.44
TSPAN17-209ENST00000515708 PROK1P58294 105 aa12.32□□□□□ -0.44
TSPAN17-209ENST00000515708 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
TSPAN17-209ENST00000515708 TIMM21Q9BVV7 248 aa12.32□□□□□ -0.44
TSPAN17-209ENST00000515708 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
TSPAN17-209ENST00000515708 C9JAW5 83 aa12.31□□□□□ -0.44
TSPAN17-209ENST00000515708 ZFAND6Q6FIF0 208 aa12.31□□□□□ -0.44
TSPAN17-209ENST00000515708 SMIM20Q8N5G0 67 aa12.31□□□□□ -0.44
TSPAN17-209ENST00000515708 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
TSPAN17-209ENST00000515708 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
TSPAN17-209ENST00000515708 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
TSPAN17-209ENST00000515708 KNCNA6PVL3 124 aa12.3□□□□□ -0.44
TSPAN17-209ENST00000515708 LITAFQ99732 161 aa12.3□□□□□ -0.44
TSPAN17-209ENST00000515708 M0QXV9 152 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 TEX29Q8N6K0 151 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 POLQO75417 2590 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 ELANEP08246 267 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 Q1RN00 199 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 FBN2P35556 2912 aa12.29□□□□□ -0.44
TSPAN17-209ENST00000515708 RNASE13Q5GAN3 156 aaKnown RBP12.28□□□□□ -0.44
TSPAN17-209ENST00000515708 NRGNQ92686 78 aa12.28□□□□□ -0.44
TSPAN17-209ENST00000515708 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
TSPAN17-209ENST00000515708 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
TSPAN17-209ENST00000515708 LINC01356Q8N9X3 169 aa12.28□□□□□ -0.44
TSPAN17-209ENST00000515708 Q9UF83 564 aa12.28□□□□□ -0.44
TSPAN17-209ENST00000515708 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.44
TSPAN17-209ENST00000515708 PRM2P04554 102 aa12.27□□□□□ -0.44
TSPAN17-209ENST00000515708 DEFB131AP59861 70 aa12.27□□□□□ -0.44
TSPAN17-209ENST00000515708 ZANQ9Y493 2812 aa12.27□□□□□ -0.44
TSPAN17-209ENST00000515708 IGHV1-58A0A0C4DH39 117 aa12.27□□□□□ -0.45
TSPAN17-209ENST00000515708 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
TSPAN17-209ENST00000515708 DSCR9P59020 149 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 A8MTW9 85 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 H3BMM0 161 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 GAGE7O76087 117 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 GAGE12FP0CL80 117 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 GAGE12GP0CL81 117 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 GAGE12IP0CL82 117 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 GAGE4Q13068 117 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 ATXN8Q156A1 80 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 DUX3Q96PT4 197 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 CHCHD7Q9BUK0 85 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 ZNF702PQ9H963 129 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 NDUFA12Q9UI09 145 aa12.26□□□□□ -0.45
TSPAN17-209ENST00000515708 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 RBMY1BA6NDE4 496 aaKnown RBP12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 RBMY1EA6NEQ0 496 aaKnown RBP12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 PRSS2P07478 247 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 RBMY1DP0C7P1 496 aaKnown RBP12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 ADAMTSL4-AS1Q5T5F5 129 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 Q6ZSN1 163 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 UBR5O95071 2799 aaPredicted RBP12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
TSPAN17-209ENST00000515708 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
TSPAN17-209ENST00000515708 TINCRA0A1B0GVN0 87 aa12.24□□□□□ -0.45
TSPAN17-209ENST00000515708 TRIAP1O43715 76 aa12.24□□□□□ -0.45
TSPAN17-209ENST00000515708 SPANXDQ9BXN6 97 aa12.24□□□□□ -0.45
TSPAN17-209ENST00000515708 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
TSPAN17-209ENST00000515708 SPANXCQ9NY87 97 aa12.24□□□□□ -0.45
TSPAN17-209ENST00000515708 SLURP1P55000 103 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 DEFB136Q30KP8 78 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 PTPN13Q12923 2485 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 J3QLI3 93 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 MAPK1IP1LQ8NDC0 245 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
TSPAN17-209ENST00000515708 A0A096LNT2 108 aa12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 A8MZ25 164 aa12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 MIAQ16674 131 aa12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 C18orf65Q6ZTR6 163 aa12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
TSPAN17-209ENST00000515708 LINC01600Q96MT4 127 aa12.21□□□□□ -0.45
TSPAN17-209ENST00000515708 CITED1Q99966 193 aa12.21□□□□□ -0.45
TSPAN17-209ENST00000515708 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.46
TSPAN17-209ENST00000515708 Q6YL49 198 aa12.21□□□□□ -0.46
TSPAN17-209ENST00000515708 LINC00467Q9BRT7 94 aa12.21□□□□□ -0.46
TSPAN17-209ENST00000515708 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
TSPAN17-209ENST00000515708 ABCA12Q86UK0 2595 aa12.2□□□□□ -0.46
TSPAN17-209ENST00000515708 NDUFV3P56181 108 aaKnown RBP12.2□□□□□ -0.46
TSPAN17-209ENST00000515708 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
TSPAN17-209ENST00000515708 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
TSPAN17-209ENST00000515708 ZNF843Q8N446 348 aa12.19□□□□□ -0.46
TSPAN17-209ENST00000515708 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
TSPAN17-209ENST00000515708 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
TSPAN17-209ENST00000515708 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
TSPAN17-209ENST00000515708 IGHV3-53P01767 116 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms