RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 LOC389332A0A1B0GUA5 103 aa14.38□□□□□ -0.11
LSM6-207ENST00000515311 Q8N8P6 123 aa14.38□□□□□ -0.11
LSM6-207ENST00000515311 FCER1GP30273 86 aa14.37□□□□□ -0.11
LSM6-207ENST00000515311 AMTP48728 403 aa14.37□□□□□ -0.11
LSM6-207ENST00000515311 K7EMI3 77 aa14.36□□□□□ -0.11
LSM6-207ENST00000515311 C18orf32Q8TCD1 76 aa14.36□□□□□ -0.11
LSM6-207ENST00000515311 DEFB104AQ8WTQ1 72 aa14.36□□□□□ -0.11
LSM6-207ENST00000515311 TMEM243Q9BU79 118 aa14.36□□□□□ -0.11
LSM6-207ENST00000515311 IFI27P40305 119 aaPredicted RBP14.35□□□□□ -0.11
LSM6-207ENST00000515311 WFDC10BQ8IUB3 73 aa14.34□□□□□ -0.11
LSM6-207ENST00000515311 PRSS3P2Q8NHM4 247 aa14.34□□□□□ -0.11
LSM6-207ENST00000515311 SIVA1O15304 175 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 LY6G6CO95867 125 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 ESDP10768 282 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 PKIAP61925 76 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 LYSTQ99698 3801 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 CHCHD5Q9BSY4 110 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 CHCHD7Q9BUK0 85 aa14.33□□□□□ -0.12
LSM6-207ENST00000515311 LINC01546A6NGU7 62 aa14.32□□□□□ -0.12
LSM6-207ENST00000515311 H7C423 109 aa14.32□□□□□ -0.12
LSM6-207ENST00000515311 DNAH10OSP0CZ25 163 aa14.32□□□□□ -0.12
LSM6-207ENST00000515311 Q9H8V8 135 aa14.32□□□□□ -0.12
LSM6-207ENST00000515311 NIT1Q86X76 327 aa14.31□□□□□ -0.12
LSM6-207ENST00000515311 ALMS1Q8TCU4 4167 aa14.31□□□□□ -0.12
LSM6-207ENST00000515311 VPS13DQ5THJ4 4388 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 LCE6AA0A183 80 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 UBE2L6O14933 153 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 Q0VG73 95 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 ORMDL2Q53FV1 153 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 LINC01556Q5JQF7 62 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 FA2HQ7L5A8 372 aa14.3□□□□□ -0.12
LSM6-207ENST00000515311 RAB5BP61020 215 aa14.29□□□□□ -0.12
LSM6-207ENST00000515311 LAGE3Q14657 143 aa14.29□□□□□ -0.12
LSM6-207ENST00000515311 C20orf203Q8NBC4 194 aa14.29□□□□□ -0.12
LSM6-207ENST00000515311 K7EP13 123 aa14.28□□□□□ -0.12
LSM6-207ENST00000515311 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.27□□□□□ -0.13
LSM6-207ENST00000515311 A0A087WX48 190 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 IGKV2-29A2NJV5 120 aaPredicted RBP14.27□□□□□ -0.13
LSM6-207ENST00000515311 TMEM262E9PQX1 116 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 LINC00614P0C842 121 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 GAGE6Q13070 117 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 TMEM18Q96B42 140 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 URB1-AS1Q96HZ7 61 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 AP5S1Q9NUS5 200 aa14.27□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BKO60814 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BJP06899 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BOP23527 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 G0S2P27469 103 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BBP33778 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BDP58876 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BCP62807 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST2H2BEQ16778 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BHQ93079 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BNQ99877 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 HIST1H2BMQ99879 126 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 DNAH1Q9P2D7 4330 aa14.26□□□□□ -0.13
LSM6-207ENST00000515311 A0A1B0GUV1 79 aa14.25□□□□□ -0.13
LSM6-207ENST00000515311 C1orf196B1AJZ1 125 aa14.25□□□□□ -0.13
LSM6-207ENST00000515311 ZNF25P17030 456 aaPredicted RBP14.25□□□□□ -0.13
LSM6-207ENST00000515311 SMAGPQ0VAQ4 97 aa14.25□□□□□ -0.13
LSM6-207ENST00000515311 MPV17L2Q567V2 206 aa14.25□□□□□ -0.13
LSM6-207ENST00000515311 MRPL52Q86TS9 123 aaKnown RBP14.25□□□□□ -0.13
LSM6-207ENST00000515311 BAGE3Q86Y29 109 aa14.25□□□□□ -0.13
LSM6-207ENST00000515311 CHCHD1Q96BP2 118 aaKnown RBP14.25□□□□□ -0.13
LSM6-207ENST00000515311 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
LSM6-207ENST00000515311 FGF6P10767 208 aa14.24□□□□□ -0.13
LSM6-207ENST00000515311 RBX1P62877 108 aa14.24□□□□□ -0.13
LSM6-207ENST00000515311 TTC32Q5I0X7 151 aa14.24□□□□□ -0.13
LSM6-207ENST00000515311 AMMECR1LQ6DCA0 310 aa14.24□□□□□ -0.13
LSM6-207ENST00000515311 RNASEKQ6P5S7 137 aaKnown RBP14.24□□□□□ -0.13
LSM6-207ENST00000515311 Q8N3U1 123 aa14.24□□□□□ -0.13
LSM6-207ENST00000515311 IGHV3-30P01768 117 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 IGHV3-33P01772 117 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 IGHV3-30-3P0DP02 117 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 IGHV3-30-5P0DP03 117 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 C10orf126Q8N4M7 172 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 TIMM21Q9BVV7 248 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 CYSLTR1Q9Y271 337 aa14.23□□□□□ -0.13
LSM6-207ENST00000515311 NBDYA0A0U1RRE5 68 aa14.22□□□□□ -0.13
LSM6-207ENST00000515311 RPL39P62891 51 aaKnown RBP14.22□□□□□ -0.13
LSM6-207ENST00000515311 Q8N976 141 aa14.22□□□□□ -0.13
LSM6-207ENST00000515311 CSDC2Q9Y534 153 aaKnown RBP14.22□□□□□ -0.13
LSM6-207ENST00000515311 LINC01549A6NIU2 74 aa14.21□□□□□ -0.13
LSM6-207ENST00000515311 C2orf66Q6UXQ4 117 aa14.21□□□□□ -0.13
LSM6-207ENST00000515311 SPANXA1Q9NS26 97 aa14.21□□□□□ -0.13
LSM6-207ENST00000515311 UBE2D4Q9Y2X8 147 aa14.21□□□□□ -0.13
LSM6-207ENST00000515311 BTF3P20290 206 aaKnown RBP14.2□□□□□ -0.14
LSM6-207ENST00000515311 TMEM101Q96IK0 257 aa14.2□□□□□ -0.14
LSM6-207ENST00000515311 SERF1AO75920 110 aa14.19□□□□□ -0.14
LSM6-207ENST00000515311 OR5A1Q8NGJ0 315 aa14.19□□□□□ -0.14
LSM6-207ENST00000515311 TOMM6Q96B49 74 aa14.19□□□□□ -0.14
LSM6-207ENST00000515311 PYGO1Q9Y3Y4 419 aa14.19□□□□□ -0.14
LSM6-207ENST00000515311 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
LSM6-207ENST00000515311 LINC00310P59036 64 aa14.18□□□□□ -0.14
LSM6-207ENST00000515311 DGAT2L7PQ6IED9 249 aa14.18□□□□□ -0.14
LSM6-207ENST00000515311 Q6ZR54 194 aa14.18□□□□□ -0.14
LSM6-207ENST00000515311 KRTAP1-5Q9BYS1 174 aa14.18□□□□□ -0.14
LSM6-207ENST00000515311 IBA57-AS1B1ANH7 110 aa14.17□□□□□ -0.14
LSM6-207ENST00000515311 HSBP1O75506 76 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms